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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Aip07g00852
ATGGAGAATGGTGGTGAAATGATCAAGAAAACTAAAGGTAGACAAAAGCGAGAGATAAAGAGGATTGAGAATAAAAAAAATTGTCAAATCGCTTTTACAAAGAGAAAAGACGGTTTACTGAAAAAGGCGAATGAAATAAAATCTTTATGTGATGCTGGTGTTGATTTGATCATATATTCTTCAAGTGGAAAAGCCTATTACTATGGCGATTCTTCATTAAAGACAATAAAAATGGCTCTCTCAAACGAACAACAACCTCAAGGTAGTAATCAGCTCCTTGGTTATATCATGGAGGAAATGTCTAGGAAGGACATGCAGAATCTCGTTAAAAAGAACGATTCACTTGTGGATCGATTAAATGCTGAGAAAGAACGAGCTGAAACTCTTTCTAACATTTTAAAGACAATTAAAACTGACAACAGCACCACCAACTGGTGGGATATGATTGGTCAAAGTTGTGGCAAAAATAAAGAGATGGAAAAAATTCTTGTAGCTCTCCAGCAGACTTTGAAAAATCAAATTTCACTCAAAATTGTTGCAAATCAGGCTACAGTTACGACTGCAGCTAAGAGTGTGGTACCTACATTTTATCGCAGTGATCAAACCATGATTCAAGTTAATTCTGGAGTTATTGGACCATACCCTACTCATGGAAGTATGAGTACTTTTTCCAACATTGCCTTTGCTACTGGTGTCAACCCTTTTGACGCTACGAGAGGATTTGGTAACCAGAATACCCCTGTTTGGTATCCATCATACCAACACCAACAAAGATATAATGATCTATTTCTCTATGATGCAAGTAACAGGAATGGTGTTGGGAGAAGCAGTGGCGGCGACGACACTGAAAATTATCTCTACCATTCAAATTATAACTATAACAATGGTAGAGGCTTTTTTGGTTTTCCATACCACAATAATCCTTTTAACAATGGTTATGGCCGCGGAGGATTCTTCTAA
960
0.3708
MENGGEMIKKTKGRQKREIKRIENKKNCQIAFTKRKDGLLKKANEIKSLCDAGVDLIIYSSSGKAYYYGDSSLKTIKMALSNEQQPQGSNQLLGYIMEEMSRKDMQNLVKKNDSLVDRLNAEKERAETLSNILKTIKTDNSTTNWWDMIGQSCGKNKEMEKILVALQQTLKNQISLKIVANQATVTTAAKSVVPTFYRSDQTMIQVNSGVIGPYPTHGSMSTFSNIAFATGVNPFDATRGFGNQNTPVWYPSYQHQQRYNDLFLYDASNRNGVGRSSGGDDTENYLYHSNYNYNNGRGFFGFPYHNNPFNNGYGRGGFF
319
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Aip07g00852
319
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
13
159
-
-
Aip07g00852
319
Gene3D
-
24
92
IPR036879
GO:0003677|GO:0046983
Aip07g00852
319
SUPERFAMILY
SRF-like
13
77
IPR036879
GO:0003677|GO:0046983
Aip07g00852
319
ProSiteProfiles
MADS-box domain profile.
12
72
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
PRINTS
MADS domain signature
14
34
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
PRINTS
MADS domain signature
34
49
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
PRINTS
MADS domain signature
49
70
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
SMART
madsneu2
12
71
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
21
68
IPR002100
GO:0003677|GO:0046983
Aip07g00852
319
Coils
Coil
105
125
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Aip07g00852
Aip-Chr7
9790869
9792458
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Aip07g00852
7
147
Type I MADS-box Gene Family
AT5G60440
30.070
1.25e-17
80.1
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Aip07g00852
SRF-TF
1.5e-16
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Aip07g00852
-
K09264
ahf:112762769
625.935
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