Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00847 ATGCCATCCTTAGGCTTGATCTCGCCGGTCGTAACTGAACGTGGTTACTCGTTTACCACCTCAGCAGAGCGAGAAATCGTGAGGGATGTGAAAGAGAAGCTGTCCTACATTGCCCTTGACTATGAATGTCCTGAGGTGCTTTTCCAACCATCCATGATAGGAATGGAAGCTGCAGGTATCCACGAGCCGACATACAACTCAATCATGAAGTGCGATGTTGATATTAGGAAAGACTTGTATGGAAACATTGTTCTATCAGGAGGAACAACTATGAGCAAGGAAATCTCTGCATTGGCTCCCAGCAGCATGAAGATCAAGCTGGTGGCTCCCTCTAAGAGAAAATATAGTGTCTGGATTGGTGGTTCTATCTTGGCATCCCTCAGCACTTTCCAGCAGATGTGGATTGCAAAGGTGGTGGTTATGCTCATGTTGGGAGTCATGAGGCCAGGAGTTAAGCTTTTCTCCAAGGCTGGAATCGCTTTTCCCTTGATGGTAGTTGGAAGCTTTGCGAGGAATTTGGTGTTGCGTCTTTGGATTCGCCTGCTTGGTCGAATGTGA 558 0.4713 MPSLGLISPVVTERGYSFTTSAEREIVRDVKEKLSYIALDYECPEVLFQPSMIGMEAAGIHEPTYNSIMKCDVDIRKDLYGNIVLSGGTTMSKEISALAPSSMKIKLVAPSKRKYSVWIGGSILASLSTFQQMWIAKVVVMLMLGVMRPGVKLFSKAGIAFPLMVVGSFARNLVLRLWIRLLGRM 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00847 185 Gene3D - 58 116 - -
Aip07g00847 185 PANTHER ACTIN 41 138 IPR004000 -
Aip07g00847 185 PANTHER ACTIN-97 41 138 - -
Aip07g00847 185 PANTHER ACTIN-97 10 42 - -
Aip07g00847 185 Gene3D - 117 137 - -
Aip07g00847 185 Gene3D Actin; Chain A, domain 4 6 41 - -
Aip07g00847 185 SUPERFAMILY Actin-like ATPase domain 10 137 IPR043129 -
Aip07g00847 185 Gene3D Actin; Chain A, domain 4 42 57 - -
Aip07g00847 185 SMART actin_3 1 147 IPR004000 -
Aip07g00847 185 PANTHER ACTIN 10 42 IPR004000 -
Aip07g00847 185 Pfam Actin 41 137 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00847 Aip-Chr7 9656786 9658506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00847 10 138 Cytoskeleton Gene Families AT3G12110 69.822 2.46e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00847 K10355 - gmx:100781831 220.32