Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00846 ATGGGTTGTGACTATTCAAATTTCTTAGTTGTCAATTCCGTCATAAGGTTGCTCGCAATGGACTTGTCAGATACTAAAAGATGGCAGAAGAATGACGCCCCGCGAGCTGTTTCTCCCAGCATTGTAGACTGCCCTCGTCACACTGGTGTGATGGTAGGAATGGACCAAAAAGATGCATATGTTGGAGATGAGGCACAATCTAAGAGAGGTATCTTGGCTCTCAAGTATCCAATTGAGCACGATATTGTAAGCAATTGGGATGCTATGGAGAAGATTTGGCATCACAAATTCTATAATGAGCTTCGAGTTGCCCCTGAAGAGCATCCAGTTTTGCTGACTAAGGCTCCTCTTAACCCGAAAGCTAATCGCGAGAAGATGACTCAAATCATGTTCGAGACCTTCAATGCCCCTGCCATCTATGTAGCCATTCAGGCTCAACCGGTATTGTGTCTGAGCCACACTGTCCCAATCTAG 474 0.4536 MGCDYSNFLVVNSVIRLLAMDLSDTKRWQKNDAPRAVSPSIVDCPRHTGVMVGMDQKDAYVGDEAQSKRGILALKYPIEHDIVSNWDAMEKIWHHKFYNELRVAPEEHPVLLTKAPLNPKANREKMTQIMFETFNAPAIYVAIQAQPVLCLSHTVPI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00846 157 SUPERFAMILY Actin-like ATPase domain 29 147 IPR043129 -
Aip07g00846 157 Gene3D - 27 154 - -
Aip07g00846 157 ProSitePatterns Actins signature 1. 60 70 IPR004001 -
Aip07g00846 157 Pfam Actin 31 145 IPR004000 -
Aip07g00846 157 CDD NBD_sugar-kinase_HSP70_actin 75 145 - -
Aip07g00846 157 PRINTS Actin signature 33 42 IPR004000 -
Aip07g00846 157 PRINTS Actin signature 122 135 IPR004000 -
Aip07g00846 157 PRINTS Actin signature 91 109 IPR004000 -
Aip07g00846 157 PRINTS Actin signature 56 67 IPR004000 -
Aip07g00846 157 PANTHER ACTIN 30 147 - -
Aip07g00846 157 Gene3D Actin; Chain A, domain 2 41 78 - -
Aip07g00846 157 PANTHER ACTIN 30 147 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00846 Aip-Chr7 9654226 9656766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00846 28 157 Cytoskeleton Gene Families AT3G12110 76.190 2.59e-73 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00846 K10355 - mus:103986777 215.312