Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00843 ATGGCGGTTTCAAACGGAATAGAAGTAGAAGCCGTTCTCCACTTCCTCAGAAAGAACGGTCTCTCTCAAGCTGAATCCGCACTCAGGCAAGATATCATCGACAAGAACGGAGCTAGTAGTGATGAAAACCTTCTTCGATCCTTCGATTACGAGAAGTTCTTCTTTCCAATGGTTCCTCCTCCGCCACCGCTCAAGCTCCGATCCTTTTCTCTCCTGCCGGAGGATCGTGCCGGTGCCGCCGCCGGAGCTTCCGGAGCCTGCTCTGTTTCCTCCGAGGATGACTTTGTTACTATAGCTTCATCTACTTCTCGTGCTCCTTCTTCAGGTTCCTTCTTTGATTTTGCATTACGTGTTCATAATTCGAACCAATTTTTGTGGTGTGATGATGAGCTCTTAAAGTACACTCAAGAGGATGAATATGAAGTATTTGACCTGAGAATTATACACAGAAAGAACAGGACTGGATTTGAAGAAAATAAGGAGCTCCCAATTGTGCTGAATACAATCATCGCGGGCAGGTACTATATAACGGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTCCAGGCTCACGATCTTCATACGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTGAATAAGCATGATCCAGCAGATCAACGCCACATATTGCGTCTTTACGATTATTTCTACCATCAGGAACATTTGTTCATTGTAACCGAGCTTCTCCGAGCAAACTTATATGAATTTCAAAAATTCAACCAAGAATCTGGAGGAGAAGCATATTTTACATTGAATAGGCTACAGCTCATTACTCGTCAGGTTTTGGAGGCGTTGCACTACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATGTTCTAATAAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTTCAATCCGACAATCTATGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTTATGTTAGGCCTTCAATATGACGAAAAAATCGACATATGGTCTCTCGGATGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAACGATGGAGTTGTGATGATTCTAGCGCGTATGATTGGAATGCTTGGTCCTATTGATCTAGAGCTGTTGGTTAAAGGGCAAGATACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTGATCAATTGGAGTACATAATTCCAGAGGAATCATCATTGGAGCAGCACCTACAAGTTTCTGATACAATGTTTATAGACTTTGTAAGATACTTGCTTAGCATCAACCCTAAAAGAAGACCTACTGCTAGACAAGCACTAAAGCATCCGTGGCTTTCCCATGTTTACAAGTCCAAATAG 1452 0.4153 MAVSNGIEVEAVLHFLRKNGLSQAESALRQDIIDKNGASSDENLLRSFDYEKFFFPMVPPPPPLKLRSFSLLPEDRAGAAAGASGACSVSSEDDFVTIASSTSRAPSSGSFFDFALRVHNSNQFLWCDDELLKYTQEDEYEVFDLRIIHRKNRTGFEENKELPIVLNTIIAGRYYITEYLGSAAFSRVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADQRHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQVLEALHYLHNLGIIHCDLKPENVLIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDGVVMILARMIGMLGPIDLELLVKGQDTHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVSDTMFIDFVRYLLSINPKRRPTARQALKHPWLSHVYKSK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00843 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Aip07g00843 483 Gene3D Transferase(Phosphotransferase) domain 1 228 476 - -
Aip07g00843 483 Gene3D Phosphorylase Kinase; domain 1 169 255 - -
Aip07g00843 483 CDD PKc_DYRK_like 174 476 - -
Aip07g00843 483 SUPERFAMILY Protein kinase-like (PK-like) 163 480 IPR011009 -
Aip07g00843 483 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 142 480 - -
Aip07g00843 483 ProSiteProfiles Protein kinase domain profile. 174 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00843 483 SMART serkin_6 174 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00843 483 PANTHER DUAL SPECIFICITY PROTEIN KINASE 142 480 - -
Aip07g00843 483 Pfam Protein kinase domain 176 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00843 Aip-Chr7 9559599 9563154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00843 171 471 MAP Kinase Gene Family AT5G19010 31.776 3.01e-35 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Aip07g00843 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00843 - - adu:107457629 721.079