Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00837 ATGCTCGAAACCAACTTCGGTGTAGGTTGCTGGTTCCTCTCCTATCCGGCGCTGATTGCGGTTGTGCATGAGACGTCACCGCTGCGGGCGGGGGCCAAAGCCGGTGCTGCACTACTTCCCGGGTCGGGGCAGGCTGAACAAATTGGACAGAAAGCGAGTGTTGAGGGTTGGATGAAATTGATAAAGCTTATTCATGTCCACACCCTGTCCCGAGGTTGGACGCGACTATATGTAAGTGAATGGCTTCATTTGTTGTCAAAGATGGATTCGAACTTACAGTTCACCGTTGGGGAGGACGATTCGGGCGGGCTTAGTGAGGAGGAGTATTTCCGTATCACTTCTTCGAGTGGGGATGACGAGGATGACTCCTATGAGAATGACTTAGAGACGGCTGAAATGGGTGACGAAACCCACGGGAATGGGGTCGGCCCAGGCCAGGAGACATGTGTGGGTGATGCTCCCAGTTTTAGGTCCACGGAGGATTTCCTGGACAAAGTGTTTAGTACCGAGGAAGAGGCTTATGCGTCATACAAACAGTTTGCCAGGCTTAGGGGGTTTGGTGTAAGGAAGGGTGACGTGACTCGAATGAACGGTATTTTGGTAAGACGAGACTTTTTTTGTCACTGTCAAGGTACAAGGCATGAGAAACACTACAATCGTCCAGAAAGAGTAAGGGAGGATAAGCCGGAGAGTCGCACGATTTGTTCAGCGAAGCTGAAAATTTACTATGGTTTGCAAGATCAGGTGTGGAAAGTCTGGAGGATAGACGACAACCATAACCACCCTCTTGCTACAACCATGTTTACTCATCTTCTTCCCAGTCACCGGAATCTAATCAGGGGGTACGGGATGCTTCAGTTTACGAAGAGGGACCTGTATAATTACATTCACAGCCAAAGGATAGCACAAATTAACGACGGAGACGCGGAAACAGCAATAAGTTATTTGGAAGGCAAGGCCAACGCGGACATGATGACTGTCGCCAGATATACGAAAACAACATGGGATCAACTTGGCAGCCTTTTCTGGGTGGATGGGCAGATGATGGCGGATTACCAGCTGTTCGGTGACGTCCTTGCATTTGATGCAACATACAGGTCAAACAAGTACAAGAAGCCTCTAGTGGTGTTCTCTGGATCAAATCATCACAAGAAGACAGCAATTTTCAGATTCTCGTTGCTGGAGGACGAGGAGGTCCGTGCATATAGATGGGTGTTGCTGAATATGCTTGATGTCATGGAAAACAAGAAGCCTTCCGTTGTGGTCACCGACGGGGATAAAGCCATGCGAGCAGCAATTGCGGATGTACTTCCTTCAGCTAGGCATCGCCTATGCGGGTGGCACTTGGAAAAAAACTGTGTCTTAAGGGTGAAGGAGCCCGAATTTTGGAAGGTCTTCAAAAAGGCTATTTATGCAAACTTCGATGTTGCCAAGTTTGAGGAGACAACTTCCAGGTGTGAGGGCATAAATGCATTCGTCAAAGGGTTCCTGAAGTCCACAAATAGCCTTCTTGAATTGGTTCAGATCCTGGATAGGGTGGTGAAAGATTACCGCAACAACGAGGTCACGGCTCAATTTTATTCATCGTACTACACGCCTGTACTAACTACAGGCCTTGATAAGATCGAGCTGTTTGCTGCGAAGTTATACACCAGGGCAATTTTCAAGGAGGTTAGGAAACAGATAAAGGGGGTTGGGAGTTTATTGTTTCTGGGAAAGACAGCATTAGCACGACGTCCGTCTACAAGTTCTCAAGCGTCGGGAACCGTCGTAAGTGAAGGCATTCCTTGCTGCCATATATTTTGCGTGATGAAGTATGAGGGTTGGGACGAAATCCCACCTGGTTTGATACTGAGGCGTTGGTGTAAAGATGCCAAGGAATGGACAGCTAACGCAACATGTAATTCATCGGGACACAACAGTCATTTATTGAGGTACGGCGCTCTATGCAGTGCCATAAGTGTCGTCGCGAAACTAGCTTCTGATGATGCAGCTGACTTCTTTTTAGCGAGGGATGCACTTACCTCTTTGGCACGGAGGCTATAG 2046 0.4819 MLETNFGVGCWFLSYPALIAVVHETSPLRAGAKAGAALLPGSGQAEQIGQKASVEGWMKLIKLIHVHTLSRGWTRLYVSEWLHLLSKMDSNLQFTVGEDDSGGLSEEEYFRITSSSGDDEDDSYENDLETAEMGDETHGNGVGPGQETCVGDAPSFRSTEDFLDKVFSTEEEAYASYKQFARLRGFGVRKGDVTRMNGILVRRDFFCHCQGTRHEKHYNRPERVREDKPESRTICSAKLKIYYGLQDQVWKVWRIDDNHNHPLATTMFTHLLPSHRNLIRGYGMLQFTKRDLYNYIHSQRIAQINDGDAETAISYLEGKANADMMTVARYTKTTWDQLGSLFWVDGQMMADYQLFGDVLAFDATYRSNKYKKPLVVFSGSNHHKKTAIFRFSLLEDEEVRAYRWVLLNMLDVMENKKPSVVVTDGDKAMRAAIADVLPSARHRLCGWHLEKNCVLRVKEPEFWKVFKKAIYANFDVAKFEETTSRCEGINAFVKGFLKSTNSLLELVQILDRVVKDYRNNEVTAQFYSSYYTPVLTTGLDKIELFAAKLYTRAIFKEVRKQIKGVGSLLFLGKTALARRPSTSSQASGTVVSEGIPCCHIFCVMKYEGWDEIPPGLILRRWCKDAKEWTANATCNSSGHNSHLLRYGALCSAISVVAKLASDDAADFFLARDALTSLARRL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00837 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 161 278 IPR031052 GO:0006355
Aip07g00837 681 PANTHER OS02G0262500 PROTEIN 161 278 - -
Aip07g00837 681 PANTHER OS02G0262500 PROTEIN 294 481 - -
Aip07g00837 681 Pfam FAR1 DNA-binding domain 177 264 IPR004330 -
Aip07g00837 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 294 481 IPR031052 GO:0006355
Aip07g00837 681 Pfam MULE transposase domain 358 452 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00837 Aip-Chr7 9435085 9438852 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00837 MULE 4.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00837 - - aip:107636207 854.744