Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00831 ATGGAAAACTACTACTATTCTGGATGGCCTCAATCTCAATGCAACAACTCTGCACCAAACAGTAACAATAATCCTTCCTTTTCAGTACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAACTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGTCTCACAGCAGTTAAAGCTGACATAGCAAGTGTTGGTGGCAGAATCAAGAGCATATTGGTGCTATGCTCTAAGGAAAATGAAGAAGGTGGTGATGGTGTTTGCCTTAACACTCTCAAACAATCACTGAAATCTGCTGTTAACAAAATTGCTTCATCATCCATGACATCAAATTGTCCCACAAGAAGTAAGAGGCAAAGGTTCTTCTTGCCTTCACATTTCATACAGTGA 771 0.4086 MENYYYSGWPQSQCNNSAPNSNNNPSFSVPTQIVPHAYDSAFASLQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMDVSKSITVPSETDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLSLTAVKADIASVGGRIKSILVLCSKENEEGGDGVCLNTLKQSLKSAVNKIASSSMTSNCPTRSKRQRFFLPSHFIQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00831 256 PANTHER TRANSCRIPTION FACTOR BHLH51 40 254 - -
Aip07g00831 256 PANTHER TRANSCRIPTION FACTOR BHLH30 40 254 IPR045847 GO:0003700|GO:0006355
Aip07g00831 256 Pfam Helix-loop-helix DNA-binding domain 68 114 IPR011598 GO:0046983
Aip07g00831 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 118 IPR036638 GO:0046983
Aip07g00831 256 SMART finulus 71 120 IPR011598 GO:0046983
Aip07g00831 256 CDD ACT_UUR-ACR-like 158 195 - -
Aip07g00831 256 CDD bHLH_AtAIG1_like 60 137 - -
Aip07g00831 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983
Aip07g00831 256 Gene3D - 60 123 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00831 Aip-Chr7 9272500 9274395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00831 54 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.262 4.17e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip07g00831 HLH 7.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00831 - - gmx:100799687 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00831 07 9272500 9274395 Aip07g00831 07 9272500 9274395 ECH
Aip10g01554 10 29485551 29489635 Aip07g00831 07 9272500 9274395 PCT