Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00829 ATGACCGTTCCCACCTTCATGTTCCACTTTGACCTACCCATGACGCTGTTCAAGGTTGCGATGATGATCGAAGACAACAACAAATTTGACGAAGAAGCAGATCGAATCAAGGGGTCATGGACTCCCCAAGAGGATGCAACGCTTCTGAAGCTGGTGGCGCAGCACGGAGCACGGAACTGGTCCGTCATAAGCAACGGGATACCGGGCCGATCGGGAAAGTCATGCCGACTGCGGTGGTGCAACCAGCTCAGCCCCGACGTTCAGCACCGACCGTTCACCCCTGCGGAGGACGAAATCATCCTTAAGGCTCACGCCGTACACGGCAACAAGTGGGCCACCATCTCCAGACTCCTTCCTGGCCGCACCGACAACGCTATCAAGAACCACTGGAACTCCACCCTCCGCCGCCGTAAAGGTGTCACCGTCGCCTTTCCCGGCGCCGGATTCCCCTCCGCGGCAGCAACCGACGCCTCCGCCAGCGGAGGATTATCCGGATTCTCTTCTGCCGCCACGTCGTCGTCATCAGATTTCAGTCCAACATTTGTTTGCCAAAAGCGCAAGGGCGAGCAGTTAGAGTTGCCACAGAATGTCAACAAGAAGCCGTGTTTGGCGGCAGTTGCCGTCAACAGTCACGCGGAGGAGGAGGTTCGCCAAAAGCGCAACGCTGAAGAAGAAGAAGAAGGCGGCGTGACGACACTGAGTTTGCTCCCGCCCGGAGAGAAGCCTTTGGGCGCAGAGGGAGTGTGGCGGAAGGAGGAGGAAGTCAATCGGTACGGCGAGCATGCATGGTTGATGAAGATGATGCGGCCCATGATAGCAGAAGAGGTTAGGAGATACATTCAAAGCTTACAAAAGACTCAACCACTCTTTGAGCCTGATCCACCTAGTAAAAATTTTTAA 900 0.5567 MTVPTFMFHFDLPMTLFKVAMMIEDNNKFDEEADRIKGSWTPQEDATLLKLVAQHGARNWSVISNGIPGRSGKSCRLRWCNQLSPDVQHRPFTPAEDEIILKAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRKGVTVAFPGAGFPSAAATDASASGGLSGFSSAATSSSSDFSPTFVCQKRKGEQLELPQNVNKKPCLAAVAVNSHAEEEVRQKRNAEEEEEGGVTTLSLLPPGEKPLGAEGVWRKEEEVNRYGEHAWLMKMMRPMIAEEVRRYIQSLQKTQPLFEPDPPSKNF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00829 299 CDD SANT 39 81 IPR001005 -
Aip07g00829 299 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Aip07g00829 299 PANTHER MYB PROTEIN-RELATED 28 220 - -
Aip07g00829 299 Gene3D - 36 88 - -
Aip07g00829 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Aip07g00829 299 SMART sant 36 85 IPR001005 -
Aip07g00829 299 SMART sant 88 136 IPR001005 -
Aip07g00829 299 MobiDBLite consensus disorder prediction 213 246 - -
Aip07g00829 299 PANTHER OS01G0850400 PROTEIN 28 220 - -
Aip07g00829 299 MobiDBLite consensus disorder prediction 157 179 - -
Aip07g00829 299 SUPERFAMILY Homeodomain-like 34 130 IPR009057 -
Aip07g00829 299 CDD SANT 91 134 IPR001005 -
Aip07g00829 299 Gene3D - 91 137 - -
Aip07g00829 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Aip07g00829 299 Pfam Myb-like DNA-binding domain 91 133 IPR001005 -
Aip07g00829 299 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Aip07g00829 299 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Aip07g00829 299 MobiDBLite consensus disorder prediction 213 227 - -
Aip07g00829 299 MobiDBLite consensus disorder prediction 153 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00829 Aip-Chr7 9263339 9264772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00829 34 178 MYB Transcription Factor Family AT4G37260 57.325 2.40e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip07g00829 Myb_DNA-binding 7.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00829 - - ahf:112702359 516.924