Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00823 ATGGATTGTGATGCTCTTACTCTATCCACTATGACTATCTCTTCACCAGGATTGTTACCAACTGAGACATTGTTAGATTCTTTGGTTCACATATCCAATGAAGTTGTCTCAATAGAGAAGCTTCCATTTGTGCAAATGAGGAATGTCTCATCCATGATAAGGAGGATCAAGCTTCTCTCTTCATTGTTTGAAGAGATTCAAGAGGCAGAAACACCACTCCCTCCTTCTTCAACTCTTTGCTTCACTGAGCTTTTATCAGTGATCACAAGGGGTAAGGTTTTGATCCAAGAAATCAAAGATGCAAGCACCCTTTGGGGCCTGATTCAGTTAGAATTCATCTCAAACCAATTCTATGTTCTTGTTAAAGAGATGGGAAGAGCCCTTGATATCTTGCCTCTTAGATTGCTCAACATAACTGCAGATATAAGGGAGCAAGTGGATCTTCTTCACAAACAAGCGAAGCGAGCCGAGTTAACCATTGATCCTAGAGAGCTCCAAAGAAGAGAAATGCTTCTAGAAGTAATGGCCAACAACATGATGCAAAACAAGAAGAACAAGGGCTATATGGATTTTGGTAAAATGGAAGAACTGTTAAGCAGCATTGGTTTGAGAACTATATCAGATTATGATATAGAAATTTCAAAGTTGGAGATTGAAGCTCAGAATCAAGCAGGAACAGGAGGACTAGTGGTTGTGTCAAACATAAACAACCTCATATCTCTTGTTTCTTATTCCAAATCAATGATTTTCAGAGATGGAGAAAATGAAGAAAGTAAGAAAGAATCTTGTTCATATTTGTACAACAAAGTCAATGATAGCTCTTCATCTTCTCAATCCATGTCAATTCCTGACGAATTTCGCTGCCCAATTTCGCTTGACTTAATGAGAGATCCTGTGATTGTTTCATCCGGCCACACATATGATCGAAATTCGATTGCGCAGTGGATAAACTCTGGCCACCATACTTGCCCCAAAAGTGGACAGAGGCTAATCCACACTGCTCTGATACCAAATTATGCACTGAAAAGTCTTGTTCAGCAATGGTGCTATGACAACAATGTTCCATTGAATGAGCCTAATTCTTCTGTTTCCGAGGAAAAGAGCAATAAGAAGAACTCAAATGACGGCGCTATTGATCACATCTCTGCCAACAAAGCGGCTGCAGATGCTGTGAAAATGACAGCAGAGTTTCTGGTTGGAAAATTGGCAACAGGCTCAGCTGACACACAAAGACAAGCTGCCTATGAGCTTCGTTTACTCGCGAAAACCGGCATGGACAACCGGCGAATCATAGCTGAGGTTCTGCTCATGTCGGCCGGCGCAGTGGACAAAATAGTCCAAGTTCTAGAACAAGGGAGAACAATGGAAGCCAGAGAGAATGCTGCAGCAACAATATTCAGCTTGAGTATGTTAGATGAATGCAAGGTTCAAATCGGAGCGCGGCCGAGGGCGGTTCCTGCATTAGTCCTACTCTTGAAAGAAGGCACACCAGTTGGGAAAAGAGATGCAGCAACTGCACTATTCAACCTTGCAGTGTACAATCCAAACAAATCAATAATTGTGAGTTCTGGTGCAGTTGATGTGCTTATTGAATTGCTAATGGATGATAAAGCTAGCATTACTGATGATGCATTATCAGTTCTTGCTTTGTTACTTGGATGCTCACAAGGACTAAAAGAAATAAGGAATAGTAGAGAGTTGGTGCCACTTCTCATTGATCTTCTAAGATTTGGATCAGTCAAAGGGAAGGAAAATTCTATAACACTTCTTCTAGGATTGTGCAAGGAAGAGACCGAGGTGGTTGCGCGGCGGTTGCTGGCGAATCCAAGGAGCGTGCCGTCGCTTCAAAGCTTGGCTGCTCATGGCTCATTGAGAGCTAGAAGGAAGGCTGATGCATTGTTAAGGTTGCTCAATAGATGCTGCTCTCAGCCTCATCATTCTCTTTGA 1947 0.4212 MDCDALTLSTMTISSPGLLPTETLLDSLVHISNEVVSIEKLPFVQMRNVSSMIRRIKLLSSLFEEIQEAETPLPPSSTLCFTELLSVITRGKVLIQEIKDASTLWGLIQLEFISNQFYVLVKEMGRALDILPLRLLNITADIREQVDLLHKQAKRAELTIDPRELQRREMLLEVMANNMMQNKKNKGYMDFGKMEELLSSIGLRTISDYDIEISKLEIEAQNQAGTGGLVVVSNINNLISLVSYSKSMIFRDGENEESKKESCSYLYNKVNDSSSSSQSMSIPDEFRCPISLDLMRDPVIVSSGHTYDRNSIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCYDNNVPLNEPNSSVSEEKSNKKNSNDGAIDHISANKAAADAVKMTAEFLVGKLATGSADTQRQAAYELRLLAKTGMDNRRIIAEVLLMSAGAVDKIVQVLEQGRTMEARENAAATIFSLSMLDECKVQIGARPRAVPALVLLLKEGTPVGKRDAATALFNLAVYNPNKSIIVSSGAVDVLIELLMDDKASITDDALSVLALLLGCSQGLKEIRNSRELVPLLIDLLRFGSVKGKENSITLLLGLCKEETEVVARRLLANPRSVPSLQSLAAHGSLRARRKADALLRLLNRCCSQPHHSL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00823 648 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 367 IPR013083 -
Aip07g00823 648 Pfam Armadillo/beta-catenin-like repeat 514 549 IPR000225 GO:0005515
Aip07g00823 648 CDD RING-Ubox_PUB 286 328 IPR045210 -
Aip07g00823 648 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 21 433 - -
Aip07g00823 648 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 435 645 - -
Aip07g00823 648 SUPERFAMILY RING/U-box 272 356 - -
Aip07g00823 648 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Aip07g00823 648 MobiDBLite consensus disorder prediction 358 378 - -
Aip07g00823 648 SUPERFAMILY ARM repeat 396 637 IPR016024 -
Aip07g00823 648 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Aip07g00823 648 Gene3D - 395 640 IPR011989 -
Aip07g00823 648 PANTHER U BOX DOMAIN-CONTAINING 21 433 - -
Aip07g00823 648 PANTHER U BOX DOMAIN-CONTAINING 435 645 - -
Aip07g00823 648 SMART arm_5 554 595 IPR000225 GO:0005515
Aip07g00823 648 SMART arm_5 474 512 IPR000225 GO:0005515
Aip07g00823 648 SMART arm_5 513 553 IPR000225 GO:0005515
Aip07g00823 648 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 483 525 IPR000225 GO:0005515
Aip07g00823 648 Pfam U-box domain 282 352 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00823 Aip-Chr7 9025545 9027599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00823 27 643 U-box Gene Family AT3G46510 33.689 4.89e-104 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00823 - - zju:107413903 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00823 07 9025545 9027599 Aip07g00823 07 9025545 9027599 ECH