Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00809 ATGGCATTGGAGAATCGTCCTTTGATCATAAAGCTTAAAATTTCTTCCAAACGAAAGCTTGACGTAAATGAAAGCGTCGAGAAAGAAGTTTCAGTGCAGAAAGAACCAGTTACTCCTGTTCAAGAGGTCTCAACTCAGTTTCACAAAGAAATATCCTGCGATGGTGCTACTGAAAAAGTTCCTGATGGTGACTGGTTTTGCCCATCATGTCGATGTGCAATTTGTGGCAAAAGTAAGATAGAAGAAAAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAACTGGTTCTGCGGAAGGGACTGTGAAAAGATATATTTTGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCACTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCCGAGAGTAGTGATCCATGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCAGAGTGATGCATGAATGTTTTGAGCCCCTAAAGGAACCTTCGTCTACCAGAGATCTCATGGAAGATGTTTTATTCAGTCAATGGTCAACACTTAATCGATTGAATTTCTATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTATGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGTACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTTTGATGAATGAGCTTGAAAAGAGGCTCATGCAGTTGGGAGTGGAGAGGCTGGTTTTGCCTGCTGTTCCTAGTGTTGTAGACACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAGAGTTCGAGAGGTCGCAATTCTTGGACAATACTTTTTTAGATTTTCAGGGTACCATCATGTGCCAGAAGCTGCTGAAGATTCCATCTCCAGAATCGGTTTTGTTAATAGAGTCCCAACAAAGGACACAGCATGTTTTGCCTGGAAACAAGTTAAATTTTGACGGTGATCTGATATCTGAAGTATTACACCAAGCAGAAGAAACTGACAAACGAGAGAGAGAGAATTCACAAATCCACAATAATTGTGCTGGAAACAATGATCATTGCAGTAATGGTGCCATTGACATTGAGCAAGTCACACCGGTGAATAAACCAAGTCTTGAGGATCAACAGTGGCAGAATGATCCACAGAGCTCTATTGTAACACAAGCTGACAGTAATAATGGCTCACCATATAAGTGCTACTACAAAAGAAGGAAATACACAAAGTTTTAG 1326 0.402 MALENRPLIIKLKISSKRKLDVNESVEKEVSVQKEPVTPVQEVSTQFHKEISCDGATEKVPDGDWFCPSCRCAICGKSKIEEKEGDFLVCIQCEHKYHFKCLRTKYATNSRNWFCGRDCEKIYFGLHKLLGEPVSVGTNNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALRVMHECFEPLKEPSSTRDLMEDVLFSQWSTLNRLNFYGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRILMNELEKRLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTEFERSQFLDNTFLDFQGTIMCQKLLKIPSPESVLLIESQQRTQHVLPGNKLNFDGDLISEVLHQAEETDKRERENSQIHNNCAGNNDHCSNGAIDIEQVTPVNKPSLEDQQWQNDPQSSIVTQADSNNGSPYKCYYKRRKYTKF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00809 441 Pfam Acetyltransferase (GNAT) family 193 280 IPR000182 GO:0016407
Aip07g00809 441 SMART PHD_3 71 120 IPR001965 -
Aip07g00809 441 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 54 375 - -
Aip07g00809 441 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 174 303 IPR016181 -
Aip07g00809 441 SUPERFAMILY FYVE/PHD zinc finger 72 128 IPR011011 -
Aip07g00809 441 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 173 322 IPR000182 GO:0016407
Aip07g00809 441 MobiDBLite consensus disorder prediction 403 423 - -
Aip07g00809 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 122 IPR013083 -
Aip07g00809 441 CDD NAT_SF 217 277 - -
Aip07g00809 441 PANTHER PHD ZINC FINGER PROTEIN 54 375 - -
Aip07g00809 441 Gene3D - 170 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00809 Aip-Chr7 8867529 8874914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00809 49 265 PHD Transcription Factor Family AT5G58610 50.420 1.60e-68 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00809 - - aip:107608183 775.007