Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00806 ATGGGTGGGAATTCACCGTGTGCCTCATGCAAGCTTCTGAGACGCAGGTGCACCAAAGATTGTGCATTTGCTCCTTATTTCCCTGCTGATGAACCCCACAAGTTTGCCATAGTCCACAAAGTTTTTGGCGCTAGCAACGTTAGCAAAATGTTGCAGGAACTTCCGGTGGAGCAAAGAGCAGATGCAGTGAGCAGCCTAGTGTACGAGGCGAATGCGAGGGTCCGGGATCCGGTGTACGGGTGTGTCGGAGCCATATCATACCTTCAAAACCAAGTCTCAGAGCTTCAAATGCAGCTAGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGCAGCAGCAAGTAGAAGAAGATCCACCAGTGATGATGATGATGATGCCACCACCTCAACTCTCAAATGAAAATGAACTCTCTCATCATCACTACTTTACTACTTTTGGATCTTCTTCTACCAACAATGTAATTCATGATTCCTTCAAGAGACAAAGTGTTTTTGGACATGACATGGTTTCTTGA 516 0.4632 MGGNSPCASCKLLRRRCTKDCAFAPYFPADEPHKFAIVHKVFGASNVSKMLQELPVEQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQQVEEDPPVMMMMMPPPQLSNENELSHHHYFTTFGSSSTNNVIHDSFKRQSVFGHDMVS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00806 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 128 - -
Aip07g00806 171 Coils Coil 85 105 - -
Aip07g00806 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Aip07g00806 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Aip07g00806 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00806 Aip-Chr7 8786428 8787573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00806 3 114 AS2 family AT2G30130 90.179 3.46e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g00806 LOB 8.3e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00806 - - cit:102614863 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00806 07 8786428 8787573 Aip07g00806 07 8786428 8787573 ECH