Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00773 ATGGTTTCAAGAGAGCAAAAGAGAGCAGCACTACTGCATGAGAAGCTTCAACTCCTTCGTTCTATTACCAACTCTCATGCTGTGAACAAAACCTCCATCATAATCGATGCATCAAAGTATATTGAAGAGCTTAAAGAAAAGGTAGAAAGACTCAATCAAGAAATAGCCACAGCAGAAACTTCAAATCATCATCATCACCATAATCCTAATTTGCCTATGGTGACAGTAGAAACCCTAGAAAAGGGATTTATGATAAATGTAATTTCAGCAAGAAGCTGCCAAGGACTACTTGTTTCAATTCTTGAAGCCTTTGAAGAGATGGGTCTCACAGTTCTTGAAGCTAGGGTTTCTTGTACGGACACTTTTCGATTCCAAGCAGTTGGAGGAGAAAATGATGAACAAGGTGAGACTATTGATGCACAAGCTGTGAAACAAGCAGTGGGACAAGCAATAAAGAATTGGAGCCAACAAAGTGCTGATCAAGATTAA 489 0.3926 MVSREQKRAALLHEKLQLLRSITNSHAVNKTSIIIDASKYIEELKEKVERLNQEIATAETSNHHHHHNPNLPMVTVETLEKGFMINVISARSCQGLLVSILEAFEEMGLTVLEARVSCTDTFRFQAVGGENDEQGETIDAQAVKQAVGQAIKNWSQQSADQD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00773 162 CDD ACT_UUR-ACR-like 95 151 - -
Aip07g00773 162 Gene3D - 2 71 IPR036638 GO:0046983
Aip07g00773 162 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 160 - -
Aip07g00773 162 Coils Coil 34 61 - -
Aip07g00773 162 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 160 - -
Aip07g00773 162 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 67 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00773 Aip-Chr7 8424007 8426298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00773 5 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.323 6.75e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00773 - - tcc:18600910 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01396 10 23749632 23752410 Aip07g00773 07 8424007 8426298 PCT