Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00766 ATGTCCAGAGAAAGGGAGAGATCAGATGATGAGGTAGGGAAGAAGATCAAGAGGGAAGGAGATGGTCAAAAAGGAAGGAGACAACACATGTTAGGTAGTCAACAACAAGCTGCTTCTGGAGGAACCCTAAATACAATCACCCCTTGTGCTGCATGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGTCCCTTTTCTCCTTATTTCTCTCCTCATGAGCCCCAAAAGTTTGCTTCGGTTCACAAAGTCTTTGGTGCCAGCAATGTCTCAAAGTTGTTAATGGAAGTGCCTGAGAATCAAAGGGCTGATGCTGCAAATAGTCTAGTTTATGAAGCAAATGTGAGGCTAAAAGATCCAGTTTATGGATGCATGGGTGCAATTTCTTCTTTGCAACAACAAGTCCAATATCTAATAGCTGAACTCAATGCTGTGAGGGATGAAATAATCAAATACAAACTTAGGGAAGTTAATAATACCATCATACCCTCATCTTCTCATCATGTAATGCTTCCTTCTTCTTCATCATCGGAGGTCGTATCTATCGCCGTTCCGCCACCTCCTCCGCCACCTAATCATGACATACTTCCTCCTAATTCTTCAACTTCTTCTTCCATGGTTTACCCCCAACAGACTGATCCTTCCAATTATGGGACAATTTCAAGTGATAATATTTCCTATTTTGGTTGA 687 0.4178 MSRERERSDDEVGKKIKREGDGQKGRRQHMLGSQQQAASGGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRADAANSLVYEANVRLKDPVYGCMGAISSLQQQVQYLIAELNAVRDEIIKYKLREVNNTIIPSSSHHVMLPSSSSSEVVSIAVPPPPPPPNHDILPPNSSTSSSMVYPQQTDPSNYGTISSDNISYFG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00766 228 MobiDBLite consensus disorder prediction 1 40 - -
Aip07g00766 228 MobiDBLite consensus disorder prediction 1 26 - -
Aip07g00766 228 ProSiteProfiles LOB domain profile. 47 148 IPR004883 -
Aip07g00766 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 32 228 - -
Aip07g00766 228 MobiDBLite consensus disorder prediction 196 228 - -
Aip07g00766 228 Pfam Lateral organ boundaries (LOB) domain 48 144 IPR004883 -
Aip07g00766 228 MobiDBLite consensus disorder prediction 181 195 - -
Aip07g00766 228 MobiDBLite consensus disorder prediction 178 228 - -
Aip07g00766 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 228 - -
Aip07g00766 228 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00766 Aip-Chr7 8328144 8329767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00766 41 228 AS2 family AT2G40470 67.196 4.10e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g00766 LOB 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00766 - - qsu:112036590 275.789