Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00711 ATGATTCTTCACCTCAATCAAAATCGCTCCTTTCTCTTCGTAAAACCTAAGCTACCACCACCACCATTGCAACCACAAACCCGGTTACGTTTTTCCCTCAAAGCTCGAACCTTTCGAGTTTTTAAGTCCACCCATATCGCTACTTTGAATAACTTCTCTCCTGTTGAGTCTAAACGCGTGCCTCGTCATGTGAAAATTGAAGCTCAGCGTGTTCTTACGGATTACTTGCATTCAACACGTGGCTACAGCTTCTTGGATGCTGAGTATATCAGTAAGAATTGCCCCAACTTTGTTAAATCTTTGATTGCAAATACTTTTGTTGGTGGAAATGATGTCGATGTTGATGTTGATGGTGTTGCTCATTCATTGAGGAAGTTTCTAAGGTACAATCCCATTAACGAGTTTGAACCATTCTTTGAGAGCATAGGGATTAGCCCCTCTGAGTTGCAAGATTTTCTACCTAGTGGCATGTTTTTCTTAGCTGATGATTCTGCTTTGGTTGATAATTTCCATGTTCTGTGTAACTATGGTGTCCCTAGGAACAGGATTGGAGAGATTTATAAGGAAGCAAAAGAGGTATTTGGGTACCCTAAGGGGTTCTTGTTGGAGAAATTTAGAGAGTATGAAGAATTAGGGTTGAGTAAATCATTTATCATCAAGCTTGGTGTTTGTTGCCCTTCAATTTTGGTTTGTGATCATCATGGTGAATTTGTGGTTGTTCTTGATTGGTTAAAGAGAATTGGGATTGAAGATGATTGGATTGTGAGTTACATGTCTTATTCAAGGACATATAGTTGGAAGAAAATGCTTGATGCTATTCAACTTCTTGATGAAGTTGGTTATTCTGAGGAACAAATGCACAATTTGTTCAAGGCAAATCCTAAATTGTTATTGGAAGGTTTTGGGAAGAAGCTACGCTTGTTTTTGGTTAGATCACATAAGTTAGGTGTTAAGGTGAATGTTATGTATTCATATTTTATGGAATATCCTCATATACTATTAAACAAGTGTGCAAAAAATTTGTTGAGAGTGATTGATATTCTGTGTGCTATTGGAATGGAAACAGATGAAATTGCACGAATTTTGTCTAATTACATGCATCTATTCAGCACACATTCCTTCAAAGGTCCGAGAACTGTTATCTCGGAGTTGAAAGTTGAGAAAGCCGAATTACTCCAAGTCATAAAGGACGATCCACTGAAACTTATAAGTATGGCTTCAATGTTCCGAGGGAGAGGTGATCTATTACAGGAGAGGTTTGATTGTTTGGTAGAAGCAGGTTTGGACTATAACAGTGTGATTGGAATGATAAAAAGAGCTCCTACGATTCTGAACCAAAAGAAAGATGTAATTAAAGAGAAGATTCATTTTGCCACAAACATCTTAGGCTATCCCTTAGAAAGCATTGTGGCATTCCCAACATACTTTTGCTATGATTTGGAGAAGATTGCTCAGAGGTTTTCAATGTATGCATGGTTGAAGGAGAGGAAGGTAGTGAATCCTTCCTTAACCTTGAGTACCATAGTTTCATCCAATGATAAACGGTTTGAAAAATATTTTGTAGATGTGCATCCTCAAGGTCCAACCATTTGGAAAAATATAAAGAGGTTATCAAAGAAAAACAAGAACAAGTAG 1635 0.3755 MILHLNQNRSFLFVKPKLPPPPLQPQTRLRFSLKARTFRVFKSTHIATLNNFSPVESKRVPRHVKIEAQRVLTDYLHSTRGYSFLDAEYISKNCPNFVKSLIANTFVGGNDVDVDVDGVAHSLRKFLRYNPINEFEPFFESIGISPSELQDFLPSGMFFLADDSALVDNFHVLCNYGVPRNRIGEIYKEAKEVFGYPKGFLLEKFREYEELGLSKSFIIKLGVCCPSILVCDHHGEFVVVLDWLKRIGIEDDWIVSYMSYSRTYSWKKMLDAIQLLDEVGYSEEQMHNLFKANPKLLLEGFGKKLRLFLVRSHKLGVKVNVMYSYFMEYPHILLNKCAKNLLRVIDILCAIGMETDEIARILSNYMHLFSTHSFKGPRTVISELKVEKAELLQVIKDDPLKLISMASMFRGRGDLLQERFDCLVEAGLDYNSVIGMIKRAPTILNQKKDVIKEKIHFATNILGYPLESIVAFPTYFCYDLEKIAQRFSMYAWLKERKVVNPSLTLSTIVSSNDKRFEKYFVDVHPQGPTIWKNIKRLSKKNKNK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00711 544 Gene3D Transcription termination factor 3, mitochondrial 127 310 IPR038538 -
Aip07g00711 544 Gene3D Transcription termination factor 3, mitochondrial 382 532 IPR038538 -
Aip07g00711 544 Pfam mTERF 380 517 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 Pfam mTERF 167 298 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 PANTHER CGI-12 PROTEIN-RELATED 49 407 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 49 407 - -
Aip07g00711 544 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 407 536 - -
Aip07g00711 544 PANTHER CGI-12 PROTEIN-RELATED 407 536 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 SMART mt_12 184 214 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 SMART mt_12 323 354 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 SMART mt_12 466 499 IPR003690 GO:0003690|GO:0006355
Aip07g00711 544 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00711 Aip-Chr7 7274291 7277325 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip07g00711 mTERF 8.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00711 - - aip:107606700 1057.74