Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00705 ATGCGTCGAGGTAGAGATGCCGTCGCCGTCGCCGCCGCAGCCGTAGCAGCAGATCCGACGCATCCAAACGCCGATTCAAGAAACAACGTCGGAGAAACGCGGTTTCGCGGAGTGAGGAAGCGACCATGGGGAAGATTCGCGGCGGAGATAAGGGATCCATGGAAGAAGGCGCGCGTGTGGCTTGGAACATTCGATTCCGCCGAGGACGCCGCCAGAGCATACGACGCTGCCGCCCGATCCTTCCGTGGACCAAAAGCAAAGACAAATTTTCCGTTCCCCAACGCCGAAATCGGAATCTCACACTCTCAGATTCCGATTCACGGTTACGATGATCCGGTTCACGGGTTCGGAAAGTACGAACCGGTTCAGGTGAATCGGCCAACGAGCAGCGGCATGAGCAGCACGGTCGAATCGTTCAGCGGACCTAGGGTTTCATCAACGGCGGCGCTTCCAGCGGTTGATCGTCGCCGAAGGAAACCGGAGAAGCCGGTTGTAGTTCCGGTCGACGATTGCCACAGCGATTGCGATTCGTCATCAACCATCGACGACGAGGATTCGTTCCGGAAAGCCCTAACTTTCGATCTAAACCTTCCGCCGCCGGAGGAAGACGACGTCGGTTTCACCGACGAGGAGATTCGCGCCACCGCCTTGTGCCTCTGA 660 0.5818 MRRGRDAVAVAAAAVAADPTHPNADSRNNVGETRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFPNAEIGISHSQIPIHGYDDPVHGFGKYEPVQVNRPTSSGMSSTVESFSGPRVSSTAALPAVDRRRRKPEKPVVVPVDDCHSDCDSSSTIDDEDSFRKALTFDLNLPPPEEDDVGFTDEEIRATALCL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00705 219 MobiDBLite consensus disorder prediction 127 145 - -
Aip07g00705 219 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 MobiDBLite consensus disorder prediction 127 165 - -
Aip07g00705 219 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Aip07g00705 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 1 186 - -
Aip07g00705 219 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Aip07g00705 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 186 - -
Aip07g00705 219 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00705 Aip-Chr7 7216802 7218209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00705 1 219 AP2-EREBP Transcription Factor Family AT1G50640 49.153 9.51e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip07g00705 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00705 K09286 - cpap:110808864 211.46