Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00701 ATGGACCACAGAGGGCAACGAGATTCACAGCCGAATGGATTTGTGGAGCCTAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCGCAGGATGGTGACGATGGAATGAGCGGCGAAACCGTGCCGGTAGAGGACGCAGAAGCGATGGACTCGTCCGCCGCAGATGCAGACATAGATGCAGAAGCAGGAGTGAGGATTGTTGAAGGGATAGGATCCTTTGGCGTGATTGAATTTTCTTCCCTCACAGCCAAGGACGTCCTTACAACGGAGTTCACAAGCCTACAGGAAGCTTATGACTACTACAACGAATTCGGTCGCATCAAGGGATTCTCGGTCAGGAGGTCCAAAGTGGGTCGCAGAACAAAGCAGGGGGCGGAGGGCGAAATAATTTGGCAGATATTCGTGTGCTCGAGGGAAGGGGAGCGAGACGGGAAACACATGCAGCGGAAAGACAGGAATAAGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGAATTAAGGTCCACGCTGATGATGCCAGCGGGCGATGGTTTGTTGAATAA 555 0.5297 MDHRGQRDSQPNGFVEPSYEFSSNFDRVHASQDGDDGMSGETVPVEDAEAMDSSAADADIDAEAGVRIVEGIGSFGVIEFSSLTAKDVLTTEFTSLQEAYDYYNEFGRIKGFSVRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQRKDRNKDPRPITRCGCEARIKVHADDASGRWFVE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00701 184 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 48 183 - -
Aip07g00701 184 Pfam FAR1 DNA-binding domain 101 183 IPR004330 -
Aip07g00701 184 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00701 Aip-Chr7 7128564 7129559 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00701 FAR1 5.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00701 - - ahf:112777976 328.561