Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00653 ATGAAACAACCCAGATTCATATTTTCATCATTTTTCTTCCTCTTGGTGGTGGTAGATTTTGTAATTCTACCCATCAATGCAGAGTCAAAGTGTAGTGAGAGTTGTGGCTTAGCTTTAGCTTCCTACTATCTTTGGGATAATTCTAACCTCACATATATTGCAACTGTGATGAAATCAGAATATGTTACAAGATCACAAGGTGAAGATATTGTGAGCTACAACAATGGCACCATAAAAAGCAAAGATTCAGTCACATCCTCCACCAGAATCAATGTTCCATTCCCTTGTGAATGCATCAATGGTGAGTTTCTTGGCCATGTATTTCAATACTCAGTTTTGAGCAGTGACACCTATGATACCATTGCAAATTGGAGCTATTCAAACTTGGTCACTGCTGAGTGGTTGCAGAATACCAATACTTATTCACCAAATAATATTCCTTATCCTGCAACTGTTAATGTCACTGTTAACTGTTCCTGTGGGAATGGTGATGTTAGCAAGGATTATGGGTTGTTCATCACTTACCCTCTTAGACCTGAGGATTCTTTGGAGTCAATTGCAAACAAGACAAAGATTGATGCTAAGTTGCTGCAGGGATATAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTGGTTTATATTCCTGGGAAAGATGAAAATGGCAACTATGTGCCCTTTAAACTAAGCAATGGAGGGAAGGGTCTATCCGGTGGCGTTATTGGTGGAATATCTGTTGGAATAGTAGCAGCACTTCTGTTATTGGTATTTGGTGTTTATGTTAAATGTTACAGAAGAAAGAAGATTTGGAACAAAAAATTGGTAGCTAAAGATTCCAGCGAGAACTTTGTTCGCCAAGGCGAAACCTCTCATAATGCTGAAAACACAACTTCAGCTTCTGATGATACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAAGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAAAAAGATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGAGCTCAATGGCGAGAGAGCTGCAATTAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCGGAACTGAAAGTGTTGACGCGTGTTCATCACTTAAACTTGGTACGCTTGATTGGATATTGTGTCGAGGGCTCTCTTTTCCTTGTGTATGAATATATCGAAAATGGAAACTTAAGCCAGCATCTGCGAAATTCAGATAGTGAGCCTTTACCATGGTCTACCCGGGTTCAAATTGCTCTGGACTCGGCCAGAGGACTTGAATACATTCATGAGCATACGATGCCTGTATATATCCATCGCGATGTAAAGTCGGAAAATATTTTATTAGACAGAAACTTCCGTGGAAAGGTTGCGGATTTTGGACTGACCAAGCTGATTGATGTTGGAAATTCATCAGCTCCAACTGCTAATATGGCCGGCACATTCGGCTACATGCCACCAGAGTACATATTTGGGAATGTTTCTCCTAAAGTAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAAGGATGGTGATGAAATTAAAAGCCTTGTAGCTTTGTTTAATGAAGTTTTTGAGCAGCCAGATCCAAATGGTGGTCTTAAAAAACTAGTGGATCCTAGGCTTGGAGATAATTACTCAGTTGATTCAGTTTTCAAGATGGCACAACTTGCCAAGGCATGCACCGAGAGAGATCCGCGGCAGCGTCCGAAGATGAGATCTGTTGTGCTTGCTCTTGGGACACTAAATTCAAACATTGAGAATTGGGATTTGCTTCTACAAAAATACTGCTCTTTTGAATCTATACTGTCTGCAAGATAG 1869 0.3991 MKQPRFIFSSFFFLLVVVDFVILPINAESKCSESCGLALASYYLWDNSNLTYIATVMKSEYVTRSQGEDIVSYNNGTIKSKDSVTSSTRINVPFPCECINGEFLGHVFQYSVLSSDTYDTIANWSYSNLVTAEWLQNTNTYSPNNIPYPATVNVTVNCSCGNGDVSKDYGLFITYPLRPEDSLESIANKTKIDAKLLQGYNPGVNFSKGSGLVYIPGKDENGNYVPFKLSNGGKGLSGGVIGGISVGIVAALLLLVFGVYVKCYRRKKIWNKKLVAKDSSENFVRQGETSHNAENTTSASDDTSIIGVKVEKSAEFSYEELANATNNFSLAKKIGQGGFGEVYYGELNGERAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRNSDSEPLPWSTRVQIALDSARGLEYIHEHTMPVYIHRDVKSENILLDRNFRGKVADFGLTKLIDVGNSSAPTANMAGTFGYMPPEYIFGNVSPKVDVYAFGVVLYELISAKEAVIKDGDEIKSLVALFNEVFEQPDPNGGLKKLVDPRLGDNYSVDSVFKMAQLAKACTERDPRQRPKMRSVVLALGTLNSNIENWDLLLQKYCSFESILSAR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00653 622 Gene3D Phosphorylase Kinase; domain 1 298 398 - -
Aip07g00653 622 SMART serkin_6 328 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00653 622 Pfam Protein tyrosine and serine/threonine kinase 329 593 IPR001245 GO:0004672|GO:0006468
Aip07g00653 622 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Aip07g00653 622 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Aip07g00653 622 CDD STKc_IRAK 334 592 - -
Aip07g00653 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Aip07g00653 622 ProSiteProfiles Protein kinase domain profile. 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00653 622 PANTHER LYSM RECEPTOR KINASE 1B 17 607 - -
Aip07g00653 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 607 IPR044812 GO:0019199|GO:0045087
Aip07g00653 622 SUPERFAMILY Protein kinase-like (PK-like) 309 595 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00653 Aip-Chr7 6368040 6388884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00653 4 607 Receptor kinase-like Gene Family AT3G21630 56.393 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip07g00653 PK_Tyr_Ser-Thr 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00653 - K13429 mtr:MTR_5g086030 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00653 07 6368040 6388884 Aip07g00653 07 6368040 6388884 ECH