Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00652 ATGGAACACAATTTCATGGTTTCATTGTTGTTCTTGTTGCTGATTACTTTACCTTTGAGTGCAGAATCAAAGTGTAGCAAGAGCTGTGACTCGGCTTTAGCTTCTTACTATCTTTGGAACAATGATTCCAGCCTGCTATATATTTCATACATCATGCAATCCAAGTTTCTTTACAAAGTTGAAGATATTGTTAGATACAACGAAGGCATATACTCATACTCATATCCATCACAAACCAGAATAAACGTTCCAATTCCTTGTGATTGCATCAATGATGGCGAGTTTCTGGGCCACACATTCCAGTACTCAGTTACTCTAGGTGACAACTACTCAGCCATTGCCAGTGGGAGCTTTTCCAACTTAGTAACTACAGAGTGGCTTCAGAACACTAACAATTATCCAAAAGATGCTATTCTTGCTGGAGGAACGGTTAATGTGACTGTTAACTGTTCTTGTGGAGACAGTAATATTAGCAAAGATTATGGACTGTTCATCACATACCCTCTTAGGACTGAGGATTCTTTGCAGTCAATTGCAAACCAGACAAAGCTTGATCCTGAGTTGTTGATGAAATACAACCCCGGTGTAAATTTCAACAAAGGGAGTGGTCTAGTTTATATTCCCGGCAGAGATGAAAACGGTAACTATCCGCCTCTTCACCCAAGCTCTGGAGGTCTACCACGTAGGGTTGTTGCTGGAATATCTGTTGGAGTTGTAGCAGTAATTATGTTATCAGCATTTTGTGTTTATATGAAGTGTTTGAAGGTATGGAAGAAAAAACTGCGAGCAGAATATTCCGGTTGGAAAACTGCTCGAGCTAGGGAAGATAAAGCCCCTAATAGCTTCGCAAACATAAGTGCAGAAAAATCAGCAGAGTTTTCATATGAAGAACTGGCCCATGCCACAAATAACTTCAATTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGAGAAATCTATTATGCAGAGCTGAATGGCAAGAAAGTTGCAATAAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCAGAACTGAAAGTTTTGACACATGTTCAGCACTTAAACCTGGTCCATTTGATTGGATATTGTGTTAAGGACTTCCTTTTCCTTGTTTATGAATACATTGACAATGGAAACTTAAGCGAACATCTACGAAATTCAGATAGAGAACCTTTGCAGTGGTCTACCCGGATTCAAATAGCTCTAGATTCAGCCAGGGGACTTGAATATATTCATGAACATACAAAGCCTGTATATATCCATCGCGATATAAAGTCGGCAAACATATTATTAGACAAATCCTTCCATGGAAAGGTTGCAGATTTCGGACTAGCAAAGCTGATTGATACTGGAAGTTCCTCAGCTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGCCACCAGAGTATGTATATGGCAGAGTTTCTCCTAAATTAGATGTCTTTGCTTTTGGGGTTGTCCTTTATGAGCTTATTTCTGCTAAAGAAGCTGTGATCAATGGTGGTGCTGAAATAAAGGGTCTTGTAGCTTTGTTTCATGAAGTTTTTGATCAGCCAGAACCTAAAGAAGGTCTTAAAGAACTGGTGGATCCTAGGCTTGGAGATAATTACTCAATTGGTTCAGTTTTCAAGATGGCACAACTTGCCAATGCATGTACAGAGGCAGATCCGAAGCGGCGTCCGAAGATGAGATCGGTGGTGGTTGCTCTTATGACACTTAGTTCAAGCACTGAGAATTGGGACATTGCTTCCTTCTATGAAAATCCAGCTCTTGTGAATCTAGTATCTGGGCCACAAGATATTGCTAACTACAACAAAGATGTCTCAACCATATCAATCATGGCTTACACAAGGGTGAATGTTCCATTCCCTTGTGAATGCATCAATGTTAACTGTTCTTGTGGGGACAGAAAAGTCAGCAAGGATTATGGTTTGTTCATCACATACCCTCTTAGGCCTGAGGATTCTTTGGAGTCAATTGCAAACCGGACAAAACTTGATCCTTTGTTGCTGCTGAGATTCAATCCTGGTGTCGATTTCAGCCAAGGGAGTGGCTTGGTCTATATTCCTGGGAAAGATGTAAATGGTAACTATGTGCCTTTTTACCCAAGCACTAGAGGTCTGCGAGGTGGGGTTATTGCCGGAATATCTGCAGGAGTTGTAGCAGCACTTCTGTTATTTGCATTTTGTGCTTATGTTAGATATTGCAGAAGGAAGAAGGTGTGGAAGAAAAAATTGCTAGTAGAACATACAAGTCGGAAAACTGCTCGGGTTATGAAAGCCTATGGTAGCATCATAGGTTACAGTGTAGAGAAATCAACTGAGTTTTCCTTTCAAGAACTAGCCAATGCCACAAATAATTTCAATTTGGCAAACAAAATAGGTCAAGGTGGTTTTGGGGGAATATATTATGCAGAGCTGAATGGCGAGAGAACTGCAATAAAAAAGATGGACAAGAAAGCATCAAAAGAGTTTCTTGCAGAACTGAAAGTGATGACCCGTGTTCATCACATAAACCTGGTGCGGTTGATTGGATATTGCGTTAAGGGTTCTCTTTTCCTTGTTTATGAATTCATTGACAACGGAAACTTGAGCCAACATCTACAAGATTCAGATAGAAAACCTTTGTCATGGTCTAACCGGATTCAAATAGCCCTGGATTCAGCCAGGGGAATTGAATATATTCATGAACATACAATGCCTGTATATATACATCGCGACATCAAATCAGCAAATATTTTAATAGACAAATACTTCCATGGAAAGGTGGCAGATTTTGGACTAGCAAAGCTGATTGATGTAGGAGGTTCATCAGTTCCAACTGATAAAATGGCAGGCACATTTGGTTACATGCCACCAGAGTACGTATTTGGCAAAGTTTCTCCTAAAGTAGATGTCTATGCTTTTGGAGTTGTTCTTTATGAGCTTATTTCTGCAAAAGAAGCTGTGATGAAGGATGGTGATGAAATTAAAGGCCTTGTGGCATTGTTTGATGAAGTTTTTAAGCAGCCAGATCCAAAAGAAGGTCTTAAAAATCTGGTGGATCCTAGGCTTGGAGATAATTACTCAATTGATTCAGTTTTCAAGTTGGCACAACTTGCCAAGGCATGTACTGAGGGAGATCCGCAGCGACGTCCAAAGATGAGATCTGTTGTGCTTGCTCTTGGGACATTAAGTTCAGCCACTGAGAATTGGGATCTGATTCTATGA 3216 0.4024 MEHNFMVSLLFLLLITLPLSAESKCSKSCDSALASYYLWNNDSSLLYISYIMQSKFLYKVEDIVRYNEGIYSYSYPSQTRINVPIPCDCINDGEFLGHTFQYSVTLGDNYSAIASGSFSNLVTTEWLQNTNNYPKDAILAGGTVNVTVNCSCGDSNISKDYGLFITYPLRTEDSLQSIANQTKLDPELLMKYNPGVNFNKGSGLVYIPGRDENGNYPPLHPSSGGLPRRVVAGISVGVVAVIMLSAFCVYMKCLKVWKKKLRAEYSGWKTARAREDKAPNSFANISAEKSAEFSYEELAHATNNFNLANKIGQGGFGEIYYAELNGKKVAIKKMDMKASKEFLAELKVLTHVQHLNLVHLIGYCVKDFLFLVYEYIDNGNLSEHLRNSDREPLQWSTRIQIALDSARGLEYIHEHTKPVYIHRDIKSANILLDKSFHGKVADFGLAKLIDTGSSSAPTANMAGTFGYMPPEYVYGRVSPKLDVFAFGVVLYELISAKEAVINGGAEIKGLVALFHEVFDQPEPKEGLKELVDPRLGDNYSIGSVFKMAQLANACTEADPKRRPKMRSVVVALMTLSSSTENWDIASFYENPALVNLVSGPQDIANYNKDVSTISIMAYTRVNVPFPCECINVNCSCGDRKVSKDYGLFITYPLRPEDSLESIANRTKLDPLLLLRFNPGVDFSQGSGLVYIPGKDVNGNYVPFYPSTRGLRGGVIAGISAGVVAALLLFAFCAYVRYCRRKKVWKKKLLVEHTSRKTARVMKAYGSIIGYSVEKSTEFSFQELANATNNFNLANKIGQGGFGGIYYAELNGERTAIKKMDKKASKEFLAELKVMTRVHHINLVRLIGYCVKGSLFLVYEFIDNGNLSQHLQDSDRKPLSWSNRIQIALDSARGIEYIHEHTMPVYIHRDIKSANILIDKYFHGKVADFGLAKLIDVGGSSVPTDKMAGTFGYMPPEYVFGKVSPKVDVYAFGVVLYELISAKEAVMKDGDEIKGLVALFDEVFKQPDPKEGLKNLVDPRLGDNYSIDSVFKLAQLAKACTEGDPQRRPKMRSVVLALGTLSSATENWDLIL 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00652 1071 Gene3D Phosphorylase Kinase; domain 1 775 860 - -
Aip07g00652 1071 CDD STKc_IRAK 311 569 - -
Aip07g00652 1071 Gene3D Phosphorylase Kinase; domain 1 276 375 - -
Aip07g00652 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Aip07g00652 1071 PANTHER LYSM RECEPTOR KINASE 1B 6 599 - -
Aip07g00652 1071 Gene3D Transferase(Phosphotransferase) domain 1 861 1068 - -
Aip07g00652 1071 Gene3D Transferase(Phosphotransferase) domain 1 376 590 - -
Aip07g00652 1071 ProSiteProfiles Protein kinase domain profile. 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00652 1071 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 631 1069 IPR044812 GO:0019199|GO:0045087
Aip07g00652 1071 SUPERFAMILY Protein kinase-like (PK-like) 772 1056 IPR011009 -
Aip07g00652 1071 Pfam Protein tyrosine and serine/threonine kinase 791 1055 IPR001245 GO:0004672|GO:0006468
Aip07g00652 1071 Pfam Protein tyrosine and serine/threonine kinase 306 570 IPR001245 GO:0004672|GO:0006468
Aip07g00652 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Aip07g00652 1071 SUPERFAMILY Protein kinase-like (PK-like) 284 572 IPR011009 -
Aip07g00652 1071 ProSiteProfiles Protein kinase domain profile. 790 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00652 1071 ProSitePatterns Protein kinases ATP-binding region signature. 796 818 IPR017441 GO:0005524
Aip07g00652 1071 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Aip07g00652 1071 SMART serkin_6 790 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00652 1071 SMART serkin_6 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00652 1071 PANTHER LYSM RECEPTOR KINASE 1B 631 1069 - -
Aip07g00652 1071 Pfam LysM domain 170 196 IPR018392 -
Aip07g00652 1071 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 599 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00652 Aip-Chr7 6345807 6356419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00652 12 599 Receptor kinase-like Gene Family AT3G21630 52.941 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip07g00652 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00652 - K13429 gmx:100803042 783.867