Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00629 ATGGTGTCTTGTATGATGGAGACATTTGGTTATGTTGCACCGGAGTATGCATGCAGTGGAATGCTGACTAAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCGGAAGAAGTTCCGTTGATTATAGTAAATCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAGCTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCAGAAACTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTTGCTCTGTTGGTTGCTCTTAA 285 0.386 MVSCMMETFGYVAPEYACSGMLTKKSDVYSFGILIMEIITGRSSVDYSKSQGEVNLIEWLKAMVGNRKSEELIDQKLPEKPSSKALKLCSVGCS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00629 94 PANTHER OS01G0323000 PROTEIN 4 88 - -
Aip07g00629 94 SUPERFAMILY Protein kinase-like (PK-like) 4 84 IPR011009 -
Aip07g00629 94 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 4 88 - -
Aip07g00629 94 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
Aip07g00629 94 Pfam Protein tyrosine and serine/threonine kinase 10 56 IPR001245 GO:0004672|GO:0006468
Aip07g00629 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00629 Aip-Chr7 5969926 5970430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00629 5 94 Receptor kinase-like Gene Family AT4G02010 42.391 6.92e-22 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip07g00629 PK_Tyr_Ser-Thr 6.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00629 - - aip:110267380 159.458