Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00628 ATGTCTGATGATATGCTTGTGCATTTCTCTTCCAATTCCTCCAACCAATCTGACCAGTCCCTTCCAACGAAGATTGCGAAGCTGGAAGCTCGAATGGTGGGCAAGGCTTCCTCCACCGCTGCTCAGCAGCCAGGTTGGTCCTCTGCCCCTTCAACTGGGAAATTTGGAGGAGCTGCTGAGGATTTAGCTGAGGCATGTAGTTCCAGTGATTCTGATGATGATAATGGTGAAGAATTCTTAATACAAGCCAACACGCAGAAGCGGCTAAAACTTCAAGAAGATGACAACTCTAATGTTTTTGAACATCTCGAGGTTATGACTGATGGAAGACAAACTAGTTCAGAGCCCGTCGAGATAAAAATAAGTAACGATGTGAATAGAAAGAAACATGGTCGTGGACGAGGCAATTCTGGTTCAGGAAGGGGCCGGGGTTCCAGATCTAATGATCAGACCAGAACACAAATACCTCCTCCAACTGCTTTGACCTCAAATGGCCAGACCGATTTATATCATAAGGATGGAAGACTCAAAGATCAACTTCGTAATGATAATTTTTCTTCTTTAGAGGAGGAGGTTGCATCTTTACGGGCAAAGGTTGTAGCATTGGAGGAGGACTTGCGTAAATCAAAACAGGAGACCTCTGAATATCAGAATCTTTGTCGGCAGTTGGAAAAGGAACTTAAGGACCTGACAGATCAAGAACAACAAATGAAGCCAAAGCGGACAAAAATAATATCTGATTTGCTGATATCGGTTTCAAAGGCTGAGAGACAAGAGGCCAGGCTGAAAGTGCGGCAAGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAAACGTGGGAAGATGGTCAAGCATTAAAGGATCTGAATGCCCAGCTTAGACAACTAATAGAAACAAAGGAGGCAATTGAACGTCAGCGCAAATTATTCAAGAAAAAACAATCTGATAAGGGCGATACAACTGATGCAGAGGCTGGATTATCAGAAGATGTTCTCATTCATGATGAAATTTATAAATCTCGACTGGCTAGCATCAAACGGGAGGAAGAAGTTATTTTGCGTGAGAGGGATCGCTATGAACTTGAGAAGGGAAGGTTGATTCGTGAAATGAAACGTATAAGGGATGAAGATGGTTCACGGTTCAACAACTTTCAGATTCTAAACCATCGATATGCCCTTCTAAACCTTCTCGGAAAGGGAGGGTTCAGTGAGGTTTACAAGGCTTTTGATTTGGTAGAGCATAGATATGTTGCCTGCAAGCTTCACGGTTTAAATCCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATGCGGCATGCAATTCGGGAGTATAATATTCACAAGTCCCTTGTGCATCATCACATTGTTCGTTTATGGGACATATTTGAGATTGACCAAAATACGTTCTGTACTGTTCTGGAATATTGTAGTGGGAAAGATCTTGATGCTGTCCTTAAAGCAACACCTATATTGCCAGAGAAGGAGGCTAGAGTCATTCTGGTTCAGATTTTTCAAGGCCTTATATACATGAATAAAAGAACACAGAAAATTATCCATTATGATTTAAAGCCAGGAAATGTTCTGTTTGATGAGCTTGGTATTGCAAAAGTGACTGATTTTGGTCTCAGCAAGATAGTGGAGGATGATGTTGGATCCCAGGGTATGGAACTTACATCCCAGGGAGCTGGAACATACTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACGCCTTATATTTCATCGAAGGTTGATGTCTGGTCTGCTGGCATTTTGTTCTATCAAATGCTCTTCGGTAGACGTCCTTTCGGGCATGACCAAACTCAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCGCGCAAGGTTGACTTTCCTACTAGGCCTGCTGTTTCTAATGAGGCAAAGGATTTCATTCGTCGGTGTCTCACGTATAACCAGATCGAGAGACCAGATGTATTAACAATTGCTCAAGATCCATATCTCACATACTCAAAGAAGTAA 2031 0.4234 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSTAAQQPGWSSAPSTGKFGGAAEDLAEACSSSDSDDDNGEEFLIQANTQKRLKLQEDDNSNVFEHLEVMTDGRQTSSEPVEIKISNDVNRKKHGRGRGNSGSGRGRGSRSNDQTRTQIPPPTALTSNGQTDLYHKDGRLKDQLRNDNFSSLEEEVASLRAKVVALEEDLRKSKQETSEYQNLCRQLEKELKDLTDQEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLRQLIETKEAIERQRKLFKKKQSDKGDTTDAEAGLSEDVLIHDEIYKSRLASIKREEEVILRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNPQWSEEKKQSYMRHAIREYNIHKSLVHHHIVRLWDIFEIDQNTFCTVLEYCSGKDLDAVLKATPILPEKEARVILVQIFQGLIYMNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPYISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVDFPTRPAVSNEAKDFIRRCLTYNQIERPDVLTIAQDPYLTYSKK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00628 676 Coils Coil 349 383 - -
Aip07g00628 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Aip07g00628 676 PANTHER BNAC09G36930D PROTEIN 1 676 - -
Aip07g00628 676 ProSitePatterns Protein kinases ATP-binding region signature. 404 427 IPR017441 GO:0005524
Aip07g00628 676 MobiDBLite consensus disorder prediction 105 170 - -
Aip07g00628 676 SMART serkin_6 398 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00628 676 Gene3D Transferase(Phosphotransferase) domain 1 389 676 - -
Aip07g00628 676 MobiDBLite consensus disorder prediction 36 50 - -
Aip07g00628 676 SUPERFAMILY Protein kinase-like (PK-like) 390 672 IPR011009 -
Aip07g00628 676 Pfam Protein kinase domain 399 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00628 676 Coils Coil 185 236 - -
Aip07g00628 676 MobiDBLite consensus disorder prediction 1 23 - -
Aip07g00628 676 MobiDBLite consensus disorder prediction 1 76 - -
Aip07g00628 676 CDD STKc_TLK 397 670 - -
Aip07g00628 676 PANTHER MIXED LINEAGE PROTEIN KINASE 1 676 - -
Aip07g00628 676 ProSiteProfiles Protein kinase domain profile. 398 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00628 676 Coils Coil 293 320 - -
Aip07g00628 676 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00628 Aip-Chr7 5955979 5962756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00628 381 676 MAP Kinase Kinase Kinase AT3G13530 27.667 6.74e-28 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Aip07g00628 Pkinase 9.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00628 K08864 - gmx:100805168 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00628 07 5955979 5962756 Aip07g00628 07 5955979 5962756 ECH