Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00624 ATGCGTATGACTAGTAGTGTCACACTTCTCTTCTTGATTCTTTGCTTCTCTACCTCCTTGTATAATGCTTCTGCTCTTGTCTCTGATGGTGTCACTCTCCTTTCACTCTTGAATCATTGGACCTTTGTTCCACTCATCATAAACTCCACCTGGAAGGACTCTGATTCTGTTCCGTGCAAATGGATTGGAGTCCAATGCAACCATGCCTATGATGTGATCTCCCTTAACCTCAGTGATCTTGGGATTCAAGGTCAACTTGGACCAGAAATAGGACAATTACATCGCTTGCAGACCCTTGTGTTGTCGAATAATGGTTTCTTAGGAGAGGTACCTTCAGAGCTAAGTAACTGTACTTTGCTTCAGGTCTTAGACCTTTCTAATAACAGCTTTAGCGGACTGATACCAAGTAGCTTCAAGAAGTTGCAAAGCTTACGCAGCATGAATTTGTCGTCTAATCTATTGGGTGGTGCGATTCCAGATTCCTTGTTTCAAATTCGTCAGCTTGAAGAAATGAACCTTCACAATAACCATCTCAGTGGTCCTATACCAACCAGTATTGGGAACTTGACTGAGCTGTTAAGGTTACACTTACATGGTAATAGGTTGTCAGGTACGATTCCTTCATCCATTGGTAATTGCAGTAAACTAGAGGAATTGTTTCTGAATGAGAACAGATTGAGTGGGGAACTATCTTTGGAGATAGCAAAGCTCAAGAATCTAAAGACTATGTCTTTGTTTGACAACCAGTTCTCAGGAGTCATTCCTCAAGACTTGGGAATCAATAGCAGCATAGTGAAACTGGACTTTACAAATAATAAGTTCACTGGTAATCTTCCACCAAGTCTTTGCTTTCAAAAGAAGTTACAAGTGCTGAACATGGGATCTAATCGACTTCAAGGTAACATACCTTCTGATGTAGGAAGGTGTACAAGTCTAAGTATGCTGATTCTCAGTGAAAATAATTTCACTGGGTCTCTTCCTGTTTTTGAGAGTAATATGAACCTCAAGTACTTACACATAAGCAAGAACAACATCAGTGGACCAATTCCACCAAGTCTAGAAAATTGTACAAATCTTGCTGCAATTAACATGTCAATGAACAAACTTACTGGACTCATACCATTTGCACTTGGAAAGCTTGTGAATCTTACGATTTTGGATGTTTCACACAACAATTTGGAAGGACCTTTGCCACCACAGCTGTCAAATTGTACTAAAATGGATCATTTTGATGTTGGATTCAATTCCCTAAACGGTTCCTTCCCATCAAGTCTGAGGAACTGGACAGGGATAACCACATTAATTTTAAGAGAGAATCATTTTACAGGTGGTATCCCGAGCTTTTTCTCAGAACTTAGCAAGCTTCGTGAACTACAACTTGGTGGAAATTTAATTGGAGGAACAATTCCTCCATCATTGGGAAAACTGCAGAAGCTGTTCTATGGGTTGAATTTGAGTAGCAATGGATTGACAGGTGTGATTCCTTTAGAACTTGGGCAACTACAAGAATTGCAAAGTCTGGACATATCACTGAACAATTTGACAGGAAACATAGATGTTCTTGCTCAAGTACCATTGATTGAGATCAATATTTCATATAATTTCTTGTATGGTCTTGTTCCAACATCCCTCTGCAAGTTTCTGGATTCCTCATCATCTTCTTTCTTGGGCAATCCCCATTTAAATGTCAGTTGTTCTCCTTCTAGTGGCCTGGATTGGACCAACACTTGTAATTTGAAGCCATGTCCCTATCAATCAACTGATCACAAAGGCATCAGTGCATTGGTAATTTTAGTGATAGAACTAGGATCCTCACTGTTTGTTTCAGCTATACTGGTAGCTTTACTTTTGATGTATCTCCGCAAGAAAGAAATGAAGAATGATGTCTATGGTGAAAAATGGGGTTCTGCTATTGAAAGAGGAGCCGGAAGGATCGGTTTTCTTTACAACGAAGAAATGAGGTTCTTAACTGAAAACCAGTCAGCTTCCCTTCACGAAATAGTGATGGAGGCTACAGATAACCTAAATGATCAATACATTATTGGCAGAGGAGCTCATGGTATTGTTTATAGAGCTCAACTGGGTTATACAACTTTTGCTGTAAAGAAGTTTGCATTCGAAAGGAACAAGAGGAAGTATTTACATATTATGCGGAAAGAAATTGAAGTGCTGGGAGGGATCAAGCATAGAAACTTGGTCTCTTTTGCAGGCTACTGGATAGGAGAGAACTATGGTATGGTCTTATATAAGTACATGAAGAATGGAAGCCTCCATGATATTTTGCATGAGAAATATCCCCCACCACCCTTAAGTTGGAGTATACGGCTTAACATTGCTGTTGGAATTGCACATGGACTAAAATATCTGCATCATGATCACACTACACCCATAGTGCATAGAGACATAAAGCCACAGAATATACTTCTTGATGATCAGATGGAGCCTCTTATATCTGATTTTGGTACTTCCCTCTATAGGAATCTTGCTGAGCATTCTTATAGTCAATCTCATTCTTGGAAAAAGCTTTCAACATATGTTGTAGGTACTGCTGGTTATATCGCACCAGAGAATGCATATGTAATAGTGCAGAGCAGAAAGTCTGATGTGTACAGCTATGGGGTAGTTCTGCTTGAGTTACTAACAAGAAAGAGAGTGGTTATTGAGGAGGAAAGAAATGTGACCGGTTTAGTTAGTTGGGTTAGCTCTATCTGGTTGGAAACAGGCAAAATTGAGGAGATTCTTGATCCAGACATTGCAAATGCATTTCCCAATTCCGGAGTATTAGCAAGGCAAGTCACTGAGGTGCTTTTATTGGCATTAAGATGCACCAAGAGGAAGCCGCGTGAGAGACCAACCATGAAAGACATTACTAGCTTCTATCAGAAAAACATATTCAAGTTGGGTTGCAATGATGTGGATATGGTTAATGAAGATGTTATTGATGTGGCACCACAACCATACAGTGTTCTAACTTTCAGTACTAATCCAGTTTCTGACACTCAAGAGTGA 3009 0.3968 MRMTSSVTLLFLILCFSTSLYNASALVSDGVTLLSLLNHWTFVPLIINSTWKDSDSVPCKWIGVQCNHAYDVISLNLSDLGIQGQLGPEIGQLHRLQTLVLSNNGFLGEVPSELSNCTLLQVLDLSNNSFSGLIPSSFKKLQSLRSMNLSSNLLGGAIPDSLFQIRQLEEMNLHNNHLSGPIPTSIGNLTELLRLHLHGNRLSGTIPSSIGNCSKLEELFLNENRLSGELSLEIAKLKNLKTMSLFDNQFSGVIPQDLGINSSIVKLDFTNNKFTGNLPPSLCFQKKLQVLNMGSNRLQGNIPSDVGRCTSLSMLILSENNFTGSLPVFESNMNLKYLHISKNNISGPIPPSLENCTNLAAINMSMNKLTGLIPFALGKLVNLTILDVSHNNLEGPLPPQLSNCTKMDHFDVGFNSLNGSFPSSLRNWTGITTLILRENHFTGGIPSFFSELSKLRELQLGGNLIGGTIPPSLGKLQKLFYGLNLSSNGLTGVIPLELGQLQELQSLDISLNNLTGNIDVLAQVPLIEINISYNFLYGLVPTSLCKFLDSSSSSFLGNPHLNVSCSPSSGLDWTNTCNLKPCPYQSTDHKGISALVILVIELGSSLFVSAILVALLLMYLRKKEMKNDVYGEKWGSAIERGAGRIGFLYNEEMRFLTENQSASLHEIVMEATDNLNDQYIIGRGAHGIVYRAQLGYTTFAVKKFAFERNKRKYLHIMRKEIEVLGGIKHRNLVSFAGYWIGENYGMVLYKYMKNGSLHDILHEKYPPPPLSWSIRLNIAVGIAHGLKYLHHDHTTPIVHRDIKPQNILLDDQMEPLISDFGTSLYRNLAEHSYSQSHSWKKLSTYVVGTAGYIAPENAYVIVQSRKSDVYSYGVVLLELLTRKRVVIEEERNVTGLVSWVSSIWLETGKIEEILDPDIANAFPNSGVLARQVTEVLLLALRCTKRKPRERPTMKDITSFYQKNIFKLGCNDVDMVNEDVIDVAPQPYSVLTFSTNPVSDTQE 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00624 1002 Gene3D Phosphorylase Kinase; domain 1 649 751 - -
Aip07g00624 1002 SUPERFAMILY L domain-like 28 327 - -
Aip07g00624 1002 Gene3D Ribonuclease Inhibitor 185 263 IPR032675 -
Aip07g00624 1002 SUPERFAMILY L domain-like 236 575 - -
Aip07g00624 1002 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 214 - -
Aip07g00624 1002 PANTHER OS08G0446200 PROTEIN 215 970 - -
Aip07g00624 1002 Pfam Protein kinase domain 679 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00624 1002 Pfam Leucine rich repeat 334 393 IPR001611 GO:0005515
Aip07g00624 1002 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Aip07g00624 1002 PRINTS Leucine-rich repeat signature 380 393 - -
Aip07g00624 1002 PRINTS Leucine-rich repeat signature 120 133 - -
Aip07g00624 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Aip07g00624 1002 PANTHER OS08G0446200 PROTEIN 7 214 - -
Aip07g00624 1002 SMART serkin_6 675 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00624 1002 ProSiteProfiles Protein kinase domain profile. 675 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00624 1002 Gene3D Transferase(Phosphotransferase) domain 1 752 971 - -
Aip07g00624 1002 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 215 970 - -
Aip07g00624 1002 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Aip07g00624 1002 SMART LRR_typ_2 452 476 IPR003591 -
Aip07g00624 1002 SMART LRR_typ_2 118 140 IPR003591 -
Aip07g00624 1002 SMART LRR_typ_2 141 165 IPR003591 -
Aip07g00624 1002 SMART LRR_typ_2 189 213 IPR003591 -
Aip07g00624 1002 SMART LRR_typ_2 93 117 IPR003591 -
Aip07g00624 1002 SMART LRR_typ_2 380 404 IPR003591 -
Aip07g00624 1002 Gene3D Ribonuclease Inhibitor 331 569 IPR032675 -
Aip07g00624 1002 ProSitePatterns Protein kinases ATP-binding region signature. 681 703 IPR017441 GO:0005524
Aip07g00624 1002 SUPERFAMILY Protein kinase-like (PK-like) 663 958 IPR011009 -
Aip07g00624 1002 Gene3D Ribonuclease Inhibitor 264 330 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00624 Aip-Chr7 5923928 5927238 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00624 96 961 Receptor kinase-like Gene Family AT1G73080 45.205 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip07g00624 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00624 - - adu:107496742 1837.77