Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00621 ATGCGTATGAGTAGTGTCACACTCTTCTTGATTCTTTGCTTCTCTACCTCCTTGTATGATGCTTCTGCTCTTGCCTCTGATGGTGTCACTCTCCTTTCACTCTTGACTCATTGGACCTTTGTTCCACCCATCATAAACTCCACGTGGAAGGGCTCTGATTCGGTTCCGTGCTCGTGGATTGGAGTCCAATGCAACCATGCCTATAATGTGATCTCCCTTAATCTCAGTGATCTTGGGATTCAAGGTCAACTTGGACCAGAAATAGGACAATTATATCGCTTGCAGACCCTTGTGTTGTCGAATAATGGTTTCTTAGGAGAGGTACCTTCAGAGCTAAGTAACTGTACTTTGCTTCAGGTCTTAGACCTTTCTAATAACAGCTTTAGCGGACTGATACCAAATAGCTTCAAGAAGTTGCAAAGCTTACGCAGCATGAATTTGTCGTCTAATCTATTGGGTGGTACGATTCCCGATTCCTTGTTTCAAATTCGTCAGCTTGAAGAAATGAACCTTCACAATAACCATCTCAGTGGTCCTATACCATCCAGTATTGGGAACTTGACTGAGCTGTTAAGGTTACACTTACATGGTAATCAGTTGTCAGGTACGATTCCTTCATCCATTGGTAATTGCAGTAAACTAGAGGAATTGTTTCTGAATGAGAACAGATTGAATGGGGAACTATCTTTGGAGATGGCAAAGCTCAAGAATCTAAAGACTATGTCTTTGTTTGACAACCAGTTCTTAGGAGTCATTCCTCAAGACTTGGGAATCAATAGCAGCATAGTGAAACTGGACTTTACAAATAATAAGTTCACTGGTAATCTTCCACCAAGTCTTTGCTTTCGAAAGAAGTTACAAGTGCTGAACATGGGATCTAATCGACTTCAAGGTAACATACCTTCTGATGTAGGAAGGTGTACAAGTCTGAGTATGGTGATTCTCAGTGAAAATAATTTCATTGTTTTTGAGAGTAATATGAACCTCAAATACTTACACATAAGCAAGAACAACATCAGTGGACCAATTCCACCAAGTCTAGAAAATTGTACAAATCTTGCTGCAATTAACATGTCACTGAACAAGTTTAATGGGCTCATACCATCTGCACTTGGAAAGCTTGTGAATCTTACGATTTTGGATCTTTCACACAACAATTTGGAAGGACCTTTGCCACCACAGCTGTCAAATTGTACTAAAATGGATCATTTTGATGTTGGATTCAATTCCCTAAACGGTTCCTTCCCATCAAGTCTGAGGAACTGGACAGGGATAACCACATTAATTTTAAGAGAGAATCATTTTACAGGTGGTATCCCGAGCTTTTTCTCAGAACTTAGCAAGCTTCGTGAACTACAACTTGGTGGAAATTTGATTGGAGGAACAATTCCTCCATCATTGGGAAAACTGCAGAATCTGTTCTATGGGTTGAATTTGAGTAGCAATGGATTGACAGGTGTGATTCCTTTAGAACTTGGGCATCTACAAGAACTGCAAAGTCTGGACTTATCACTGAACAATTTGACAGGAAACATAGATGTTCTTGATAAACTACTTTCATTGACTGAGATCAATATTTCAAACAATTTCTTGCATGGTCCTGTTCCGAAATCTCTCTTTAAGTTTCTGAATTCCTCGTCATCTTCTTTCTTGGGTAATCCCCATTTATGTGTCAGTTGTTCTCCTTCTAGTGGCCTGAATTGCACCAACACTAGTAATTTGAAGCCATGTCCCTATCAATCAACTGATCACAAAGGCATCAGTGCATTGGTAATTTTAATGATAGAACTTGCATCCTCACTGTTTGTTTCAGCTATGCTGGTAGCTCTACTTTTGATGTATCTCCGCAAGAAAGAAATGAAGAATGATGTCTATGGTGAAAAATGGTTGTCTGTTATTAAGTTCTTCACTGAAAACCAGTCAGCTCCCCTTCACGACATAGTGATGCAGGCTACAGATAACCTAAATGATCAGTACATTATTGGCAGAGGAGCTCATGGGATTGTTTATAGAGCTCAACTGGGTTATACGACTTTTGCGGTAAAGAAGATTGCATTTGAAAGGAACAAGAGGAAGTATTTACATATTATGCGGAAAGAAATTGAAGTGCTGGGAGGGATCAAGCATAGAAACTTGGTCTCTTGTGCAGACTACTGGATAGGAGAGAACTATGGTTTAGTCTTATATAAATACATGAAGAATGGAAGCCTCCATGACATTTTGCATGGGAAACATCCCCCACTACCCTTATGTTGGAATATACGGCTTAACATCGCTGTTGGAATTGCACATGGGCTAAAATATCTGCATCATGACCACACCACACCCATAGTGCATCGAGACATAAAGCCACAGAATATACTTCTTAATGATGACATGGAGCCTCTTATATCTGATTTTGGTACTGCCCTCTACAGGAACCTAGCTATACATTCTTATAGTCAATCTCAGTCTTGGAAAAAGCTTTCAACGTATGTTGTAGGTACTGCTGGTTATATTGCACCAGAGAATGCATATGTAATAGTGCAGAGCAGAAAGTCAGATGTGTACAGCTACGGGGTAGTCCTGCTTGAGTTACTAACCAGAAAGAGAGTGGTTGTTGAGGAGGAAAGAAAGGTAACCGGTTTAGTGAGTTGGGTTAGATCTATCTGGTTGGAAACAGGAAAAATTGAGGAGATTGTTGATCCAGATCTTGCAAATGCATTTCCCAGTTCAGGACGACTAGCATGGCAAGTCACTAAGGTGCTTTTATTGGCATTAAGATGCACCGAGAGGAAGCCGCGTAAGAGACCAACCATGAAAGACATTGTTGGCTACTATCAGCAAGAGATATTCAAGTTGAGTTGCGATGATGTGGATATGGTTAATGAAGATGTTGTTGATGTGGCACCACAACCATACAGTGTTCCATTTTTCAGTACTAATCCATTTTCTGACACTCAGTGTGACTCTTATATGCATGGTGAAACTAGTGAGGCTGCAATGCTGAGACATAACAAGTTTGCATTATATGTGGACAATGAACCTCAAGATTCTAATGGTTTCAGCTGGTGGCAAGATTTTAGTCAATCTCAAAATTCTTTGGTTGATTGGAATGTGATGGCTACAACTAAAACTTCTGTTGATGGATTCACAGTTAAATTAATAGGCAATGGTAAGACATATACTGAACAAGTAGTAGTAACTGCACTATTTGTTCATAAAGTAACCTATACTTGGCCTTATTTGTTCTTCCTTCCAACTGTGAATGGACCAGTAGTTACTCAACCCTTCAACTGGTTTTTCCTCTCTTGTTTGACTCAGTATATGTATCAGCAGAAATCATTGAAATCACAGCTCAAGTCCTGCTTTATAGCACCTATCAATGACTCTTCATCTTGTGTTATTGTGTGTAACAATGGAGTAAATGATGATGGTTGTATTGTTGGCAGAGGAGCCCATGCAATAGTTTATAAAGTCCAGCATAATGGTCTAGCTCTTGCTGTAAAGAAAATTGTATTTAGAGGACAGGACAACAAGCGCTTAGAAATCATGAAAAGAGAAGTCGAAACCCTCTATATGATTAAGCACATAAATTTGGTAAGTATCCTGGGGTACAGCGTGGCTAAGGACTATGGTTTAATATTTACTCGCTACATGGAAAAGGGAAGCCTTCATGATATTTTGCATAGGAACATTCCATCACCAGCCTGGAATGTTCGGCTTAAGATAGCTCATGGAATTGCACAGGGACTAAAATACCTGCATTATGATTGCGATCCGCCGATAGTGCACCGAGACATCAAACCACAGAATATACTCCTTGATGCTGAGATGGAGCCTCATATTTCAGATTTTGGTACTGCCAACATCAGGAACCTAGCTGAGGATTCTTATACTCATTCTGATTTCCCTTGGCAAAAGCTTTCAGCACGTATAGCTGGTACTGCTGGCTATATGGCACCAGAGTGTGCATATGCAACAGAGCCAAGCAGAACTTTTGACGTATATAGCTATGGAGTAGTGTTGCTTGAGCTAATAACCAGAAAAAGAGTGTTAGTTGATGGCAATGAACATATAGTGAGTTGGGTTAGATCTGTCTGGGATGATGAAACAAACAAAATTGACAAGATTGTTGATTCATACCTTGCAGCTTCATTTCCCAATTCAGCAGTGTTGGAAAAGCAAGTAACCGCGTTGCTTTCGTTGGCATTGAGATGCACAGAGAGAGATCAACGCAATCGACCAATGATGATAGAAGTGGTCAACTTCTACAGAAAAAGCATATTCAAGTTGAGGTGTGATCATATGGCTAATGATAATAATGATGGTGCTGAAGTTGCTGTAGGTGTAGCACCACAACCACCATTCAATAATGAACCAGATATCAGTACTAATCCAGTTTCCAACACTCAGGGTCAGGGAGACTCCTATGTGCATGAAGAAAGTAATGAACCACAAGATGTCTATGCTTTAGATGATTTGAGGCTTGTGTCTACACCTAAAATTGGTGTTGATGGACTCATAATTAAAGTAATAGGCAATGGTAAGTTACGTGTTGAACAAGTTGCAGTGAAAACTGGACCGGTTGTTCCTAAAGTGACCTACACTTGGCCTTATTTGAAGTTCCTTCCAACTGTGACTGGACCACTTATTCCTTGTGATGTTGAAAATGATGACACGTCAACCCAGATAATTAGACATCTTAACGCACATAAAGGTGGACGAGTTACATTTATCCCACTTAACAGAGTGAGGGCACCACGCATTACTTATCCCCAGAGTTCTGATGTCATCCCTCTCTTAAAGAAATTGAATTTTAAACATGACTATAACCCTGCATTCAGTCAGGTATTTGCCCGAACGGTTGTGTGCAAGAATTTGGATGTGGCATCAAGGGTTGCCAGGACTGATGGTCTTGACTGCATAACACTGGATGGTGATCAAGTTAGCAAGAAAGGTAGTATGACGGGAGGATTTTATGATCACAGACGATCAAAATTGAAGTTTATGAATATCATTAAGCAAAATGAAGATGAAATTCACTCAAAAGAGGAGGAATTGATGAAAGTTAGATCTGCCCTGCAAGATATTCTTTAA 5079 0.3995 MRMSSVTLFLILCFSTSLYDASALASDGVTLLSLLTHWTFVPPIINSTWKGSDSVPCSWIGVQCNHAYNVISLNLSDLGIQGQLGPEIGQLYRLQTLVLSNNGFLGEVPSELSNCTLLQVLDLSNNSFSGLIPNSFKKLQSLRSMNLSSNLLGGTIPDSLFQIRQLEEMNLHNNHLSGPIPSSIGNLTELLRLHLHGNQLSGTIPSSIGNCSKLEELFLNENRLNGELSLEMAKLKNLKTMSLFDNQFLGVIPQDLGINSSIVKLDFTNNKFTGNLPPSLCFRKKLQVLNMGSNRLQGNIPSDVGRCTSLSMVILSENNFIVFESNMNLKYLHISKNNISGPIPPSLENCTNLAAINMSLNKFNGLIPSALGKLVNLTILDLSHNNLEGPLPPQLSNCTKMDHFDVGFNSLNGSFPSSLRNWTGITTLILRENHFTGGIPSFFSELSKLRELQLGGNLIGGTIPPSLGKLQNLFYGLNLSSNGLTGVIPLELGHLQELQSLDLSLNNLTGNIDVLDKLLSLTEINISNNFLHGPVPKSLFKFLNSSSSSFLGNPHLCVSCSPSSGLNCTNTSNLKPCPYQSTDHKGISALVILMIELASSLFVSAMLVALLLMYLRKKEMKNDVYGEKWLSVIKFFTENQSAPLHDIVMQATDNLNDQYIIGRGAHGIVYRAQLGYTTFAVKKIAFERNKRKYLHIMRKEIEVLGGIKHRNLVSCADYWIGENYGLVLYKYMKNGSLHDILHGKHPPLPLCWNIRLNIAVGIAHGLKYLHHDHTTPIVHRDIKPQNILLNDDMEPLISDFGTALYRNLAIHSYSQSQSWKKLSTYVVGTAGYIAPENAYVIVQSRKSDVYSYGVVLLELLTRKRVVVEEERKVTGLVSWVRSIWLETGKIEEIVDPDLANAFPSSGRLAWQVTKVLLLALRCTERKPRKRPTMKDIVGYYQQEIFKLSCDDVDMVNEDVVDVAPQPYSVPFFSTNPFSDTQCDSYMHGETSEAAMLRHNKFALYVDNEPQDSNGFSWWQDFSQSQNSLVDWNVMATTKTSVDGFTVKLIGNGKTYTEQVVVTALFVHKVTYTWPYLFFLPTVNGPVVTQPFNWFFLSCLTQYMYQQKSLKSQLKSCFIAPINDSSSCVIVCNNGVNDDGCIVGRGAHAIVYKVQHNGLALAVKKIVFRGQDNKRLEIMKREVETLYMIKHINLVSILGYSVAKDYGLIFTRYMEKGSLHDILHRNIPSPAWNVRLKIAHGIAQGLKYLHYDCDPPIVHRDIKPQNILLDAEMEPHISDFGTANIRNLAEDSYTHSDFPWQKLSARIAGTAGYMAPECAYATEPSRTFDVYSYGVVLLELITRKRVLVDGNEHIVSWVRSVWDDETNKIDKIVDSYLAASFPNSAVLEKQVTALLSLALRCTERDQRNRPMMIEVVNFYRKSIFKLRCDHMANDNNDGAEVAVGVAPQPPFNNEPDISTNPVSNTQGQGDSYVHEESNEPQDVYALDDLRLVSTPKIGVDGLIIKVIGNGKLRVEQVAVKTGPVVPKVTYTWPYLKFLPTVTGPLIPCDVENDDTSTQIIRHLNAHKGGRVTFIPLNRVRAPRITYPQSSDVIPLLKKLNFKHDYNPAFSQVFARTVVCKNLDVASRVARTDGLDCITLDGDQVSKKGSMTGGFYDHRRSKLKFMNIIKQNEDEIHSKEEELMKVRSALQDIL 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00621 1692 Pfam Protein kinase domain 1141 1415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 Pfam Protein kinase domain 659 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Aip07g00621 1692 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Aip07g00621 1692 MobiDBLite consensus disorder prediction 1451 1473 - -
Aip07g00621 1692 Pfam SMC proteins Flexible Hinge Domain 1549 1627 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aip07g00621 1692 ProSiteProfiles Protein kinase domain profile. 1136 1423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 ProSitePatterns Protein kinases ATP-binding region signature. 1142 1164 IPR017441 GO:0005524
Aip07g00621 1692 PANTHER OS08G0446200 PROTEIN 1128 1428 - -
Aip07g00621 1692 PANTHER OS08G0446200 PROTEIN 213 950 - -
Aip07g00621 1692 PRINTS Leucine-rich repeat signature 118 131 - -
Aip07g00621 1692 PRINTS Leucine-rich repeat signature 374 387 - -
Aip07g00621 1692 Gene3D Phosphorylase Kinase; domain 1 637 731 - -
Aip07g00621 1692 Gene3D Phosphorylase Kinase; domain 1 1123 1213 - -
Aip07g00621 1692 SMART SMC_hinge_2 1517 1628 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aip07g00621 1692 Coils Coil 1667 1687 - -
Aip07g00621 1692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Aip07g00621 1692 SUPERFAMILY L domain-like 300 573 - -
Aip07g00621 1692 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Aip07g00621 1692 ProSiteProfiles Leucine-rich repeat profile. 497 519 IPR001611 GO:0005515
Aip07g00621 1692 Gene3D Ribonuclease Inhibitor 324 567 IPR032675 -
Aip07g00621 1692 PANTHER OS08G0446200 PROTEIN 6 214 - -
Aip07g00621 1692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1256 1268 IPR008271 GO:0004672|GO:0006468
Aip07g00621 1692 MobiDBLite consensus disorder prediction 1439 1473 - -
Aip07g00621 1692 SUPERFAMILY L domain-like 28 320 - -
Aip07g00621 1692 SUPERFAMILY Smc hinge domain 1549 1673 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Aip07g00621 1692 SMART LRR_typ_2 374 398 IPR003591 -
Aip07g00621 1692 SMART LRR_typ_2 116 138 IPR003591 -
Aip07g00621 1692 SMART LRR_typ_2 139 163 IPR003591 -
Aip07g00621 1692 SMART LRR_typ_2 446 470 IPR003591 -
Aip07g00621 1692 SMART LRR_typ_2 91 115 IPR003591 -
Aip07g00621 1692 SMART LRR_typ_2 187 211 IPR003591 -
Aip07g00621 1692 ProSiteProfiles Protein kinase domain profile. 655 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 ProSitePatterns Protein kinases ATP-binding region signature. 661 683 IPR017441 GO:0005524
Aip07g00621 1692 Gene3D - 1588 1653 - -
Aip07g00621 1692 Gene3D Transferase(Phosphotransferase) domain 1 1214 1436 - -
Aip07g00621 1692 Gene3D Transferase(Phosphotransferase) domain 1 732 956 - -
Aip07g00621 1692 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1128 1428 - -
Aip07g00621 1692 Gene3D - 1549 1587 - -
Aip07g00621 1692 SUPERFAMILY Protein kinase-like (PK-like) 1139 1417 IPR011009 -
Aip07g00621 1692 SMART serkin_6 1136 1423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 SMART serkin_6 655 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00621 1692 Gene3D Ribonuclease Inhibitor 27 178 IPR032675 -
Aip07g00621 1692 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 213 950 - -
Aip07g00621 1692 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 214 - -
Aip07g00621 1692 SUPERFAMILY Protein kinase-like (PK-like) 639 938 IPR011009 -
Aip07g00621 1692 Gene3D Ribonuclease Inhibitor 179 323 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00621 Aip-Chr7 5880605 5890537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00621 94 937 Receptor kinase-like Gene Family AT1G73080 46.963 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip07g00621 Pkinase 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00621 - - aip:107608088 2225.67