Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00600 ATGTCCAAGTGGTACTTAAACATGGGGGAAAGAAGTGGCCATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTGAAAACTCTGGTTCTCATGTTGAGGATGGGGCTTCCGAGCCACATCTTGGTATGGGGTTTGAATCTGAAGATGCTGCAAAGAATTTCTATAACGAGTATGCCCGACGTTTGGGTTTCACTCCCAAAGCTAGCCCGCAGAGTCGTTCAAAACCTGATGGGGCAAATGCGTATCGGGAATTTGTTTGTGGTGGCGATGGTTTAAAAAGAAAGCCTAATGAAACTTGTAATGCAATGATTAGGATAGAGCGAAAGGGTCAACATAAGTGGTTTGTTACAAAATTTGTGAAGGAGCATAGTCATTCCACGTCAAGTTCCGGTGAAGTGCACAGTCTTCAGCCACGAAGGCACTTTTCTAGTGTTGGAAGAACAATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCCAGTGGTGTCATGTATATATCTATGGATAGGGCTCCTGGGAATCGCAATTCCACTGAGAACATTCATGGTAGTAGGAATTTTCCTGCAGTTGGTGCTAAGACTAATCACCAAGTTTCTGCAGTTGCTACCAAGACTAATCACCAAGTTCCTGCAGTTGCTGCTAAGACTAATCACCAAGTTCCTGCAGTTGTTGCGAAGACTAATCACCAAATAAAAAATTCTACATCAATTAATTATACTGTTAAACAGCCTGTTCAGAAGAAGACACTTGGGAGGGATTGTCAGAACCTGCTGGAGTATTTTAAGAGAATGCAGGCGGAAAACCCTGGTTTCTTCTATGCTATACAACTTGATGAAGATAACCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGAGTGCTTACAATCATTTCGGTGATGCAATTAGTCTGGACACAACATTCAAAGTGTATCAATACAAAGTGCCATTTGTACCATTCACTGGGGTAAACCATCATGGCCAGACAATTTTATTTGGTTCTGCACTCCTTTTGGATGATTCTGAAGATTCTTTTGTGTGGCTTCTCAAGACATTTCTGACAGCAATGAATGACCGCCACCCCATTTCTATCACTACTGGTCAAGATAGAGCCATTCAGAGTGCAGTTTCACAAGTTTTCCCCCATGCACGGCACTGTCTAAACAAGTGGGATGTCTTGAGAGAAGGTCAGGAAAGGTTGGCTCATGTATGTCACATGCATCCAAATTTTCAGGGTGAACTTTATAATTGTATTAACCTGACCGAAACGATTGAAGAGTTTGATTCATCTTGGAATTCTATTATGGAAAAGTATGAACTTGGAAGAAATGAATGGCTGCAGTCATTGTACAATGCTCGTGCTCAGTGGGTCCCAGCATATTTCCGTGATTCATTTTTTGCTGCAATATCTCCTAATCATGGATTTGATAGCTCTTTTTTCGATGGTTTTGTTAACCCGCAAACAACATTACCAATTTTCTTTAGGCAGTATGAACAAGCTATGGAGATGTGGTTTGAAAGGGAAATAGAATTAGATTCTGAGACAATTTGCAGCCAACCTGTTTTGAAGACACCTTCACCAATGGAGAAACAGACTGCTAATCTTTATACACGAAAAGTATTTTCAAAGTTTCAAGAGGAACTAGTTGAAACTTTTGTTTATACTGCAAACAGAATTGAAGAAGAAGGGGCAAATAGCATATTCAGGGTTGCTAAATTTGAGGATGACCAAAAGGCATATATTGTCACATTAAACCATTCCGAGTTGAAGGCTGACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTGTGTAGGCATGTCCTTACTGTTTTCACTGTTACTAATGTACTTACTTTACCATCCCATTACATCTTGAAACGGTGGACAAGGAATGCAAAAAGTTATGTTGGATTGGATGAACATGCCAGTGAATCACATGGACTGGATTCTATGACATCTCGGTATGGCACTCTGTGTCGAGAAGCCATAAAATATGCGGAGGATGGGGCAATATCTGTGGAAACTTATAGTGCTGCAATGGGTGCTCTTAGAGATGTAGGAAAGAAAGTTGCTGTCGCAAAGCGAAATTTTGCAAAAGTTGCACCGGCTAGTAGTAGGAGTATCAGCAATGCTCATGATGACAAGAAAAACCAGACTTCAAGATCAGATACACCCCCTCTTTTGTGGCCACGGCATGATGAAACAACAAGGAGGTTTAATCTTAATGATGCTGGTGCACCTGTTCAACAGTCATTTGGCGATCTAAACTTCCCTAGAATGGCTCCAGTATCTGTCCAGCGAGATGATGGTCAAGATGAAAACATGGTAGTTCTTCCCTGTATGAAATCAATGACATGGGTAATGGAAAATAGAAGCTCAACTCCGGGGAATAAAGTAGCTGTTATCAATCTGAAGTTACAAGATTATACCAAGGTTCCATCAGCAGAAACGGAGGTTAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCCGGCATCAGTGAACAACTTTCTACACCAGCTAATAAGGTTGCTGTAATAAATCTGAAGCTTCAAGACTCCGACACAATTTCTGGCGAGTCTGAAGTCAAGTTTCAGGTTTCCAGGGACACATTGGGTGCTATGCAACGATCAATGTCCTATATCCGTGAGCAACTTTCTTCTGATGGCTATGTGCAGTCAGATCCTATCTCTGTAACGAAAAGGCAGAAGAAGTGA 2823 0.3978 MSKWYLNMGERSGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENSGSHVEDGASEPHLGMGFESEDAAKNFYNEYARRLGFTPKASPQSRSKPDGANAYREFVCGGDGLKRKPNETCNAMIRIERKGQHKWFVTKFVKEHSHSTSSSGEVHSLQPRRHFSSVGRTMPETYQGVGLVPSGVMYISMDRAPGNRNSTENIHGSRNFPAVGAKTNHQVSAVATKTNHQVPAVAAKTNHQVPAVVAKTNHQIKNSTSINYTVKQPVQKKTLGRDCQNLLEYFKRMQAENPGFFYAIQLDEDNHMSNVFWADARSRSAYNHFGDAISLDTTFKVYQYKVPFVPFTGVNHHGQTILFGSALLLDDSEDSFVWLLKTFLTAMNDRHPISITTGQDRAIQSAVSQVFPHARHCLNKWDVLREGQERLAHVCHMHPNFQGELYNCINLTETIEEFDSSWNSIMEKYELGRNEWLQSLYNARAQWVPAYFRDSFFAAISPNHGFDSSFFDGFVNPQTTLPIFFRQYEQAMEMWFEREIELDSETICSQPVLKTPSPMEKQTANLYTRKVFSKFQEELVETFVYTANRIEEEGANSIFRVAKFEDDQKAYIVTLNHSELKADCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSYVGLDEHASESHGLDSMTSRYGTLCREAIKYAEDGAISVETYSAAMGALRDVGKKVAVAKRNFAKVAPASSRSISNAHDDKKNQTSRSDTPPLLWPRHDETTRRFNLNDAGAPVQQSFGDLNFPRMAPVSVQRDDGQDENMVVLPCMKSMTWVMENRSSTPGNKVAVINLKLQDYTKVPSAETEVKFQLSRVSLEPMLKSMAGISEQLSTPANKVAVINLKLQDSDTISGESEVKFQVSRDTLGAMQRSMSYIREQLSSDGYVQSDPISVTKRQKK 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00600 940 Pfam FAR1 DNA-binding domain 80 153 IPR004330 -
Aip07g00600 940 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 211 865 - -
Aip07g00600 940 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 52 186 - -
Aip07g00600 940 MobiDBLite consensus disorder prediction 734 761 - -
Aip07g00600 940 Pfam MULE transposase domain 331 421 IPR018289 -
Aip07g00600 940 SMART 26again6 620 647 IPR006564 GO:0008270
Aip07g00600 940 Coils Coil 52 55 - -
Aip07g00600 940 Coils Coil 15 15 - -
Aip07g00600 940 MobiDBLite consensus disorder prediction 198 216 - -
Aip07g00600 940 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 186 IPR031052 GO:0006355
Aip07g00600 940 MobiDBLite consensus disorder prediction 51 70 - -
Aip07g00600 940 ProSiteProfiles Zinc finger SWIM-type profile. 609 645 IPR007527 GO:0008270
Aip07g00600 940 Pfam SWIM zinc finger 609 643 IPR007527 GO:0008270
Aip07g00600 940 MobiDBLite consensus disorder prediction 197 216 - -
Aip07g00600 940 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 211 865 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00600 Aip-Chr7 5606333 5610308 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00600 MULE 3.1e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00600 - - aip:107608865 1799.64