Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00561 ATGGGTCATTTTGAGGATTATCTACATTCTACAGCTTTAAAGATTCAAAAGAGATACCGCGGATGGAAGGGAAGAAAAGATTTTTCGAGAATATGCAACCGCATTGTAAAAGTTCAGAGTCAATTCCTACTGCCTCTGTCCTTGTGTCCTTGCAGAGTCAATGCTAGAGTTTCTTTGAACTTGAAGTGTAAAAAACTACAAGTTGGATCTTGTTTGAAATCCAAACTCAACCCTACTCACCTGGAAGTAGTTGATACATCTGGAGGGTTCTTCGTGAACTTCTTGAGTTCAAAAGTGATCGTGCTCCAATACCTGTAG 318 0.3962 MGHFEDYLHSTALKIQKRYRGWKGRKDFSRICNRIVKVQSQFLLPLSLCPCRVNARVSLNLKCKKLQVGSCLKSKLNPTHLEVVDTSGGFFVNFLSSKVIVLQYL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00561 105 Pfam IQ calmodulin-binding motif 12 28 IPR000048 GO:0005515
Aip07g00561 105 Gene3D - 6 42 - -
Aip07g00561 105 ProSiteProfiles IQ motif profile. 8 37 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00561 Aip-Chr7 5142718 5143631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00561 2 41 CAMTA Transcription Factor Family AT5G64220 52.500 2.78e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00561 K21596 - aip:107607302 86.6557