Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00559 ATGTTTCTTCCACAACCCTTTTTGGTCAGAAGTAATAAATCTCAAACTAAGCCAAAGCAGAATTCAAGTCCTCCCAAACAAAAATCTTCTGCTCAAACTTCAGTGTCAAATGCTATTGAGAGAACAATTTCTAGCAGCCTTAAGTCCTTCTCCTTTAGTGATCTGAAGGAGGCAACTAAGAACTTCCGGCGAGAGAATTTGATCGGCGAGGGAGGGTTCGGGTTTGTGTACAAAGGGTGGATAGATGAGAACACTTTTGCTCCCACAAAACCAGGGACTGGTATAGTAGCAGCCATAAAGAAGCTTAAGCCAGAAAGCTTTCAAGGACACCAAGAATGGCTTGCAGAAGTGAACTATCTAGGGCAGCTTCACCATGAAAATCTTGTAAGACTTATTGGTTATTGCTTGGAAGGGAAGAATAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAACCATTTATTCAGAAAAGGTGTTCAACCGATTCCATGGATTATGAGGATCAACATCGCCATAGCTGTTGCTAGAGGATTAGCATTCTTGCATTCCCTCGATTCAAATATCATTTTTCGCGATTTAAAGGCTTCCAATGTCCTACTAGACTCTGATTTCAATGCGAAGATTTCGGATTTTGGCTTGGCAAGAGACGGTCCTACCGGAGATAATACACACGTTTCAACCAGAATTATTGGAACTCATGGTTATGCTGCACCAGAGTATGTAGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGCGTTGTCTTGCTAGAGTTATTAACCGGAAGGCGTGTAGTCGAAAACGAGAAAGAAGGAATTCCAGAAGAAACATTGGTGGATTGGGCGAGGCCATTCCTAAGTGATAGCAGAAGGATTTTGAGAATCATGGATACCAGGTTGGGTGGACAGTACTCTAGGAAAGGAGCTCAAGCCGCGGCCGCACTCGCCTTGCAGTGCCTGAATGCTGATCCAAAATATAGGCCACAAATGGTGAATGTTTTAGCTGCATTGGAAGCACTTCAATCCACAAATTCAATCACAAGGACCCCAAAAAGGGCAACTGAGAGTAGTGCAACCAGCAAACATTCTTCTAATCATTCCCAAAAGTCACTTTCAAGTGCTCAAAAACTATGA 1152 0.4271 MFLPQPFLVRSNKSQTKPKQNSSPPKQKSSAQTSVSNAIERTISSSLKSFSFSDLKEATKNFRRENLIGEGGFGFVYKGWIDENTFAPTKPGTGIVAAIKKLKPESFQGHQEWLAEVNYLGQLHHENLVRLIGYCLEGKNRLLVYEFMQKGSLENHLFRKGVQPIPWIMRINIAIAVARGLAFLHSLDSNIIFRDLKASNVLLDSDFNAKISDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVENEKEGIPEETLVDWARPFLSDSRRILRIMDTRLGGQYSRKGAQAAAALALQCLNADPKYRPQMVNVLAALEALQSTNSITRTPKRATESSATSKHSSNHSQKSLSSAQKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00559 383 CDD STKc_IRAK 68 346 - -
Aip07g00559 383 MobiDBLite consensus disorder prediction 1 35 - -
Aip07g00559 383 SMART serkin_6 62 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00559 383 PANTHER OS01G0588500 PROTEIN-RELATED 12 372 - -
Aip07g00559 383 Pfam Protein tyrosine and serine/threonine kinase 65 341 IPR001245 GO:0004672|GO:0006468
Aip07g00559 383 Gene3D Phosphorylase Kinase; domain 1 36 147 - -
Aip07g00559 383 PANTHER TYROSINE KINASE FAMILY PROTEIN 12 372 - -
Aip07g00559 383 MobiDBLite consensus disorder prediction 8 35 - -
Aip07g00559 383 SUPERFAMILY Protein kinase-like (PK-like) 29 343 IPR011009 -
Aip07g00559 383 ProSiteProfiles Protein kinase domain profile. 62 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00559 383 MobiDBLite consensus disorder prediction 351 383 - -
Aip07g00559 383 Gene3D Transferase(Phosphotransferase) domain 1 148 372 - -
Aip07g00559 383 ProSitePatterns Protein kinases ATP-binding region signature. 68 101 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00559 Aip-Chr7 5083760 5087130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00559 10 343 Glycoside Hydrolase AT3G07070 46.176 1.12e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip07g00559 PK_Tyr_Ser-Thr 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00559 - - gmx:102664409 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00104 04 1014488 1018582 Aip07g00559 07 5083760 5087130 PCT