Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00557 ATGGATTTCAGTCATTCGTTTAACAGTGAGGGCGAAGACTCGGTTGGGAGTGCCTCCGATGATAGTTGTGGACATTATTGTCCTAGTGGTGATACATACGACGACGAGGAGAACCTCGAATGCAGTGCGGGTGGCGCTAGCGGGGAAAATAGTGAAGGTGGTGCCGATGATGGTGATGGGTCGGGTGATGCAGATGATGTGGCAGAGGGTTGTCTCCGCCGGCCAGTCGCTGCGAAGGACTTCTTGGGAAAAGAGTTTGCAACTAAGGAGGATGCTTACGCTGCCTACAAGGAATTCGCTAAATTAAGGGGTTTCGGAGTTCGGAAGGGAGATGTAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTCTGTCATCGACAAGGTACAAGACATCCAAAGCACTACGACCGTCATGAGCGAGTAAGGGAGGAGAGGTTGGAGAGTCGCACGGACTGCAAGGCAAAGTTGAAGATTTACTATGATATGCAGCATAGTGTGTGGAGGGTCAGCACCATCGTAGACGAACACAACCACGAGCTTGCCCCAGCAGTGTTCGCACGTCTCCTTCCTAGTAATCGGAAGATGAGTGAGGGTGACAAGGCACAGGTGGATAGTTGGAAGCAATTTGGGATCGCAACGTCGAAAACAATGGCTTACATGGCGGGGCAAGTTGGTGGGTATGGCATGCTCCGATTTACCAAACGGGATGTGTATAATTATGTTCACGGGCAAAGGGTTGCACGAATAATCGACGGTGACGCCGTGGCGACTATCAGTTATTTGGAGGGAAAGGCAAATGCTGACATGAGGAGCGTGGCGAGATACACACGAACCCCGGACAATCGTTTGGGCAGCCTATTTTGGACTGACGGTGAGATGATGACGGATTATCAGCTTTTTGGTGACGTCTTGGCCTTTGATTCGACGTACCGATCTAAAAAGTACAAGAAGCCACTGGTGGTTTTCTCTGGATCAAATCACCACAAACAAACAACTATATTTGGGTTCGCATTGTTGGAGGATGAGGAGGTCCGCACTTATAGTCCAAAAATTCATTTCTCAGTCCACAGGAAGCAAAGATTGACAAGCAAGAGTATGAATGAGCCCATTTCTCGGGATTTCAACGTCCAGCCCAAAGACCCATCACGTTTCCACGGCCTTTATGGTGGCGCTGTTACAGTTGCTGCAAGCCAGCCATCGCGCTTGAAGAGCCCCCTATTCGCCAGCCCTCTCAGCCCGCATCCCCATGCCTCCACACCATGA 1269 0.5035 MDFSHSFNSEGEDSVGSASDDSCGHYCPSGDTYDDEENLECSAGGASGENSEGGADDGDGSGDADDVAEGCLRRPVAAKDFLGKEFATKEDAYAAYKEFAKLRGFGVRKGDVARVNGVLIRRDFFCHRQGTRHPKHYDRHERVREERLESRTDCKAKLKIYYDMQHSVWRVSTIVDEHNHELAPAVFARLLPSNRKMSEGDKAQVDSWKQFGIATSKTMAYMAGQVGGYGMLRFTKRDVYNYVHGQRVARIIDGDAVATISYLEGKANADMRSVARYTRTPDNRLGSLFWTDGEMMTDYQLFGDVLAFDSTYRSKKYKKPLVVFSGSNHHKQTTIFGFALLEDEEVRTYSPKIHFSVHRKQRLTSKSMNEPISRDFNVQPKDPSRFHGLYGGAVTVAASQPSRLKSPLFASPLSPHPHASTP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00557 422 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g00557 422 MobiDBLite consensus disorder prediction 1 67 - -
Aip07g00557 422 Pfam MULE transposase domain 305 350 IPR018289 -
Aip07g00557 422 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 80 349 IPR031052 GO:0006355
Aip07g00557 422 PANTHER OS02G0262500 PROTEIN 80 349 - -
Aip07g00557 422 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00557 Aip-Chr7 5068531 5070010 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00557 FAR1 3.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00557 - - aip:107607194 593.964