Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g00542 | ATGTTTTATGTTATATCCCTCTTCTCTTCTTTCCTCGTTCACAACGACCACCCTTCTTCCTTCTCTCCTTCGTCATCTTCTTCTTCTCATAACTCCTACACCGTCTTAAGAAAAATAAACCAAAACGACGTCGCATCTTCCATCAAGGACTGGTTCAACACGCTTGACCCACTCATCACCCGAATCTTTCAGATTCTCTCTTCGACCGACTCCTCCTCCTATAACGACGACGCCGCCGTCGATGCCTCTCTCTCCGCCCTAACGCTACCCCGTCTCGACGAGTCCTTCGTCCTCACCGTACTCCACCATGGCACCGCCGCCGCACACGTCTACCCCTGTCTCCGCTTCTTCCATTGGGCCGGCCGCCAGCCCGACTTCCACCACACTCGCGGCACCTTCTCCGCCATCTTCCGAATCCTCGCTCCCGCCCCATCAGTGGAAGGCCTTGACGAATTCCTCCAATCCTTCAATCGTCGTGGCCCCGCTTTGTGTGGGAGCAATAGGTTTGGTCATGCTGTTAGGTTGGTTAGGGAGTTTGGGAATTTGGGACTGGTGCCGTTGGATCATGCTTATGGGGTTTGTATAAGGGACCTTGTGCAGGGTGGCCGGTTAAATGAGGCCTTGAAGTTTTACAGACAGAAGAAGGAAGATGAAGGATACATTCCTGGTTTGGGGAGTTACAACCTGTTGATTTACAAGCTCTTGAGGGAGAACAGACTCATCGAGGTGTATGATTTGTTTACAGACATGTCTGAGACTAATGTTCCGCCGAATACGGCTACCATGAATGCTGTGCTGTGCTTCTTTTGTAAGGCGGGGATGGCGGATGTAGCTCTTGATCTGTTCAAGTCGAGGTCAGAGTTTATGCTGTCCCCAAATCATATGGCTTATAAGCACTTGATACTTGCTTTGTGTTGGGACGGAAACGCCAAAGAAGCATTCAGTGTGTTCAAGAGCTCGATCGATCACTGTTTTATTCCAGATACAGGGACCTTTACTAGGCTTGCTAATGTTCTGTGTAGAGAGTGCATGATTGATGAGATGAAAGAGTTGCTCCATTTTGCCTTGGAATGGAAAATTATGCCTAATGCTTCCACGTATGACAACTTTATAACGGCACTGTGCCGGACAGGAAGAGTGGAAGATAGTTATTTGATACATGGGGAACTTAAAGGTGCGTCTTCTAGCAGGGCCTATGCAAATATGATAAAGGGTTTTAAAGAGTTGAACAGGGGAGATATTGCTGCTCGTCTTCTCGTTGAAATGAAGGAGAAGGGTCATAAAGTGACACCGGCTCTATGTAGAGTTGTTGTTTGTTGTTTACTTCAGATGGACAATTCAAGGTCTCGGTTTTTGAGTTTGTTTGAGATGCTGTCTCATAATGATCGTCAACATTATATTTATGATTGTTTCATTGATGCGGCTGGGCATGCCAAGCAGGCTGAGTTGGCTTGGAAAGTGTTTGAGTTGATGCAGAGGAATGGCATTCAGCCTACTTCATCTTCTCTATTTCTTATGTTGAAAGCTTATTTGGAAAGTGGAAGGACTTATGATGCTCTTAACTTCTTTAATAATGTTTGGTCCCGTGGATTGGCTACTAGAAAGTTATATAATTGCTTGGTCGTTTCTCTCTGCAAAAGCAAGAATCCTGAACCTGCGTATCTTCTCTTACAACAAATGTTAAGAGACGGTTTTCATCCAAGCATTGAATGCTATGAGAATCTTGTACTGGCGCTTTGTTCATCGAAAAGATATCATGAGGCAGTGAATCTTGTTAATGTGTATGAGAAAATGGGACGTCAATTAACCTCTTCTCTCGGTAACATACTTCTTTCTCAATCTATGTCTTCACTGGAAGTTTACAATGCCTGTGTTCGTTTAAGAGGAGTGAAAGAGGAGGGAGAAACTGATTGGTCAATGCTTAGCTTTGTGGTTGGTGCATTTTATGATCATCATAGAGTTAGCCATGTTGAGGACTTGGAGAAACTAATAGCAAAGTGCTTTCCACTTGACATTTACACTTACAATTTGTTGTTGAGAAAAGCATGTAAGAGTGATATGGGGCAGGCTTGTGAGTTGTTTGAAAGGATGCGTCGAAGGGGCTTTGAGCCCAACCGGTGGACTTATACCATCCTGGTTTATGGTTTCAAAAGGCATGGGACGAGAGACGAGGCTGAGAGTAACCATTCTCATTCGGCGATCTTTCTCTGTTACCTTCAAATATGTGGTCTCTTAGTGGTCGAGCATCTCTTCTTCTCAGTCAATTCTGGTACTTTGGAGTCTTCTAGAAGGACATATGATCGTTTGTTGTTGCCGAATACGTTTTACCATTCCGGGCATGCCTCCCTGAAATTCGCTGTGAGTAGGCGCGAACTTTCTTCGCAAGGTGATGCCAATAGCATGATAGATCAGGATGGTTTGGAGGAATCACACTGCGAATTTACAGAGAAAGAAGGACTTCTTGGTTTGCTTACGGATAAATTTGATAAAGAAAGGAAAGAAAAAATCAGACAAAATATCTCACGGGCATGGCGCAAGATTAACCTTAACCCTCACAACCCTGAGTGTAAAGCTGAACTGATTGAGAAGTTGGTAGAAGCAAAAAGTCTGAGTGAATTTAGGGAGAGATATCTTCCTACTTATGTTAGTTTGATTGCTAAATTGTCTGATTATGAGCTACATGAATTAGAGAAGTACTTTGAGGGTTATCCAGAACCTTCTAAAGGGAAATTTGCTGGAATTCTTTTATCAATTCGTGGCGCTCAGGCCAAAAGAAATGCAGTTTTAGTTGAACACTATATAACCGTTGGGTTAAAAGAAGATGCCAAAGATTTATTGAAGAAGATGGAAGATGAAGACCTACAAAAGAATCCTCGGGTTGGTAGGTATTTACTTCTGTCTTATGTGAAATTGGGTGATATAGATGAAGTGAGAAGAATTTGGGAGCTTTGTCAAGTTAGCCCTCGAAGGGAAGTGTGTCTGGCTGCAATTAAGTCTCTTGCTGAATTGAATAAAATTGATGAAGCAGAGGCGGCTTTCGAGTTTATGTCCAAGAGAGGGCTGCTTCTACCCAAAAACTACTCACTTATGCTGAAGATTTATGCAAATAATAAGATGGTAAAAAAGGGCACCGATCTCGTTATGCAAATGGCAGACAATGGGATCCAAATAGGCCCATTGACATGGGACGACCTAGTTAAACTTTATATCAAAGCAGGGGACGTTGAGAAGGCAGAAACCGTTTTACAGGAGGCAATCCTTCTGAACAAGGAGAAACCATATATCAAGTCTTATACTGCTATTATGGAACTTTATGCCAATACAGGTGATATCCATAGTATAAAGATGATTTGGCACAAAATGAAAGAAGTGGGCTACAAGTTTAGTTCGAGGCAATACGAAATTCTACTACAGGCATATTTAATTGCCAAGCTTCCGGCACATGGAATGAGGGACATGATGAAAGCCGATAACATAGTTCTCAACCCAGTTCTTCGGCGTTTGTTGGTTCAAGTTGATCCTTTTCATAAGATTGAAACCTTAGATTTGCGTATCTTTAATGTGCAGCATAAACTTGTCTCCATTGATGATAATGCTTCTCACTCTGAAAATTATTTCAAATTTACTATTTTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGGTGGTTCTGTTGGAAAAAGTCACCAGTGTTTGGTTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATATTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGAATTTGATTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACGGGGCCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGATTTTCATTGGCATGGGTGGATTTGGCCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCGGTCGTGGCGGTTAAGAGGATCTTGGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGAGTGTAGTGGTGATGATGATGAAAAATTTAATGACAGGGGAAGCCATAGGTTTTTGGTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGA | 4269 | 0.4289 | MFYVISLFSSFLVHNDHPSSFSPSSSSSSHNSYTVLRKINQNDVASSIKDWFNTLDPLITRIFQILSSTDSSSYNDDAAVDASLSALTLPRLDESFVLTVLHHGTAAAHVYPCLRFFHWAGRQPDFHHTRGTFSAIFRILAPAPSVEGLDEFLQSFNRRGPALCGSNRFGHAVRLVREFGNLGLVPLDHAYGVCIRDLVQGGRLNEALKFYRQKKEDEGYIPGLGSYNLLIYKLLRENRLIEVYDLFTDMSETNVPPNTATMNAVLCFFCKAGMADVALDLFKSRSEFMLSPNHMAYKHLILALCWDGNAKEAFSVFKSSIDHCFIPDTGTFTRLANVLCRECMIDEMKELLHFALEWKIMPNASTYDNFITALCRTGRVEDSYLIHGELKGASSSRAYANMIKGFKELNRGDIAARLLVEMKEKGHKVTPALCRVVVCCLLQMDNSRSRFLSLFEMLSHNDRQHYIYDCFIDAAGHAKQAELAWKVFELMQRNGIQPTSSSLFLMLKAYLESGRTYDALNFFNNVWSRGLATRKLYNCLVVSLCKSKNPEPAYLLLQQMLRDGFHPSIECYENLVLALCSSKRYHEAVNLVNVYEKMGRQLTSSLGNILLSQSMSSLEVYNACVRLRGVKEEGETDWSMLSFVVGAFYDHHRVSHVEDLEKLIAKCFPLDIYTYNLLLRKACKSDMGQACELFERMRRRGFEPNRWTYTILVYGFKRHGTRDEAESNHSHSAIFLCYLQICGLLVVEHLFFSVNSGTLESSRRTYDRLLLPNTFYHSGHASLKFAVSRRELSSQGDANSMIDQDGLEESHCEFTEKEGLLGLLTDKFDKERKEKIRQNISRAWRKINLNPHNPECKAELIEKLVEAKSLSEFRERYLPTYVSLIAKLSDYELHELEKYFEGYPEPSKGKFAGILLSIRGAQAKRNAVLVEHYITVGLKEDAKDLLKKMEDEDLQKNPRVGRYLLLSYVKLGDIDEVRRIWELCQVSPRREVCLAAIKSLAELNKIDEAEAAFEFMSKRGLLLPKNYSLMLKIYANNKMVKKGTDLVMQMADNGIQIGPLTWDDLVKLYIKAGDVEKAETVLQEAILLNKEKPYIKSYTAIMELYANTGDIHSIKMIWHKMKEVGYKFSSRQYEILLQAYLIAKLPAHGMRDMMKADNIVLNPVLRRLLVQVDPFHKIETLDLRIFNVQHKLVSIDDNASHSENYFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYPQGGGSVGKSHQCLVFGLTGAGVALLVMSCLLGVYIWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNTGPIWFKIDELEKATDNFSTKIFIGMGGFGLVFKGVLSDGSVVAVKRILESDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVECSGDDDEKFNDRGSHRFLVMITCRMETLKTICFW | 1422 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 635 | 771 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 1024 | 1173 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 922 | 1023 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 99 | 286 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | PANTHER | RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED | 26 | 158 | - | - | |
Aip07g00542 | 1422 | PANTHER | RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED | 162 | 727 | - | - | |
Aip07g00542 | 1422 | PANTHER | OS02G0127600 PROTEIN | 162 | 727 | - | - | |
Aip07g00542 | 1422 | Gene3D | Phosphorylase Kinase; domain 1 | 1294 | 1397 | - | - | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 534 | 625 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 287 | 448 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Gene3D | Tetratricopeptide repeat domain | 449 | 533 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 395 | 429 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat family | 671 | 716 | IPR002885 | - | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 671 | 704 | IPR002885 | - | |
Aip07g00542 | 1422 | TIGRFAM | PPR: pentatricopeptide repeat domain | 466 | 499 | IPR002885 | - | |
Aip07g00542 | 1422 | TIGRFAM | PPR: pentatricopeptide repeat domain | 536 | 568 | IPR002885 | - | |
Aip07g00542 | 1422 | TIGRFAM | PPR: pentatricopeptide repeat domain | 673 | 705 | IPR002885 | - | |
Aip07g00542 | 1422 | TIGRFAM | PPR: pentatricopeptide repeat domain | 226 | 259 | IPR002885 | - | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 464 | 498 | IPR002885 | - | |
Aip07g00542 | 1422 | PANTHER | OS02G0127600 PROTEIN | 26 | 158 | - | - | |
Aip07g00542 | 1422 | SUPERFAMILY | TPR-like | 503 | 595 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 223 | 257 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | Pentatricopeptide repeat domain | 1095 | 1140 | IPR002885 | - | |
Aip07g00542 | 1422 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1329 | 1351 | IPR017441 | GO:0005524 | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 533 | 567 | IPR002885 | - | |
Aip07g00542 | 1422 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 258 | 292 | IPR002885 | - | |
Aip07g00542 | 1422 | SUPERFAMILY | Protein kinase-like (PK-like) | 1302 | 1418 | IPR011009 | - | |
Aip07g00542 | 1422 | ProSiteProfiles | Protein kinase domain profile. | 1323 | 1422 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 467 | 496 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 226 | 252 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 399 | 426 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 261 | 283 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 1061 | 1084 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 297 | 319 | IPR002885 | - | |
Aip07g00542 | 1422 | Pfam | PPR repeat | 537 | 565 | IPR002885 | - | |
Aip07g00542 | 1422 | SUPERFAMILY | TPR-like | 667 | 1137 | IPR011990 | GO:0005515 | |
Aip07g00542 | 1422 | Pfam | Protein tyrosine and serine/threonine kinase | 1329 | 1388 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g00542 | Aip-Chr7 | 4862753 | 4875175 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g00542 | 1186 | 1407 | Receptor kinase-like Gene Family | AT1G11050 | 50.901 | 7.73e-60 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Aip07g00542 | PK_Tyr_Ser-Thr | 8.1e-06 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g00542 | - | - | aip:107606466 | 1446.03 |