Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g00507 | ATGTTAACCACAATCCTCAGAAGAACTTCTTCTTCTGCTATCACGAAGCGCTCTCTCGCCGCCGCCGTAACCTCCGCTACCGACCCCTTTCTCCCCCAACTCACCTCTTCCTCCGCATCCTCCGGAGATTCACCCGTCGGCGAGCTCCGACGATTCTCCGGGTTAACTGGGTTTTTGAAAGGGAGAGCCTTTCACTCTAATTCAGGGCCATTGAATTTCCGCTCCTCGTTCTGTTCTCGCGCGGAGTTTGCAGTTGAGGATTACGCCTACGAAGAAGGGTCTAGAGGGAACAGCGCCGATGAAGGTCTTGAGATCGCGAAGCTTGGGATTTCGCAGGATATTGTTTCTGCTCTTGCAAAGAAAGGAATCTTCAAGCTCTTTCCTATTCAGCGAGCTGTGCTGGAACCTGCTATGCAAGGACGTGATATGATTGGTCGAGCTAGAACAGGAACTGGAAAGACTCTTGCGTTTGGGATACCAATCATAGATAAGATCATTCAGTTCAATGCTAAGCATGGGCGAGGAAGGAATCCCTTGGCTTTGGTTTTGGCTCCTACCAGAGAGCTTGCACGACAGGTTGAGAAGGAATTCCAGGAAGCAGCACCTAACTTGGATACCATCTGTGTTTACGGGGGTACACCCATCTCTCGTCAGATGAGGCAGCTTGATTACGGTGTTGATATTGCTGTAGGCACGCCTGGCCGAATTATCGACCTTCTAAACAGAGGTGCCCTGAATTTACAGGAAGTTAAGTATGTTGTTATCGATGAAGCTGATCAGATGCTTCAAGTTGGCTTTCAAGAAGATGTTGAAAAGATCTTGGAGAGGTTGCCCCCTAAACGTCAGACTCTTATGTTCTCTGCAACAATGCCTTCTTGGATAAAGCAGATTACTCGTAACTACCTACAGGATCCCCTGACCATTGATCTTGTTGGAGAATCTGATCAGAAGTTGGCAGATGGAATTTCGCTATATTCTATTGCAACTGATATGTATGTTAAAGCAGGAATTCTCGGACCTCTAATAACAGAACATGCAAAAGGAGGAAAATGCATTGTTTTCACTCAAACCAAACGTGACGCCGATCGATTAACATATGGCTTGGCAAAAACTGTTCAATGTGAGGCCTTGCATGGAGACATATCCCAAGCTCAGAGGGAAAGAACTCTGGCTGGATTCAGAAATGGACATTTTAACGTTTTGGTTGCAACAGATGTTGCTTCACGTGGGCTTGATATACCAAATGTGGATCTTGTAATACACTTTGATCTTCCCAATTCATCGGAGATATTTGTTCATCGATCTGGACGAACAGGTCGTGCTGGTAAGAAAGGAACTGCTATTCTTGTTTATACTGAAGATCAATCCAGGGCTGTTAAGACCATTGAGCGTGATGTGGGATGTAGATTTTCAGAGCTACCAAGGATTGCTGTTGATCCTGGATCAGTGGACATGGGTGGTGGACGATTCGGTTCTTATGGAGGTGGAAGGGATCGTCGATCTGGTGATTCAGGTTTTGGTCGTAGTCCTGGATTTGGTCGTTCAGGCGGCTATGGAAACTCTGGGTTTGGCCGCTCTAGCTATGGAAATTCTGGGTCAACTTCTAGTCGTTTTGGTGACTCTGGTATGAGTCGACCCAGGGGGGGATTTTCAGGTGATTCATCTGGGGGATCAGGCTTTGGTCGGTTTGGCTCCTCTGATGGCTTTGGTTCAGGTCAATCGGGGAGTAGATCCGGAGGATTCAGTCGTCCAGGTGGTTTTGGTGGTTCAGATCGTTCAGGTGGTGGTGGTTTTGGGGGATTTGGTGGTTCAGATCGTTCAGGTGGTTTTGGATCTTTTGGCTCAAGTCAATCTAGTGCCTTTGGTGTTGCTGATCAGAACAATAAGGGAAGATTCTAA | 1899 | 0.4708 | MLTTILRRTSSSAITKRSLAAAVTSATDPFLPQLTSSSASSGDSPVGELRRFSGLTGFLKGRAFHSNSGPLNFRSSFCSRAEFAVEDYAYEEGSRGNSADEGLEIAKLGISQDIVSALAKKGIFKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIIDKIIQFNAKHGRGRNPLALVLAPTRELARQVEKEFQEAAPNLDTICVYGGTPISRQMRQLDYGVDIAVGTPGRIIDLLNRGALNLQEVKYVVIDEADQMLQVGFQEDVEKILERLPPKRQTLMFSATMPSWIKQITRNYLQDPLTIDLVGESDQKLADGISLYSIATDMYVKAGILGPLITEHAKGGKCIVFTQTKRDADRLTYGLAKTVQCEALHGDISQAQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHFDLPNSSEIFVHRSGRTGRAGKKGTAILVYTEDQSRAVKTIERDVGCRFSELPRIAVDPGSVDMGGGRFGSYGGGRDRRSGDSGFGRSPGFGRSGGYGNSGFGRSSYGNSGSTSSRFGDSGMSRPRGGFSGDSSGGSGFGRFGSSDGFGSGQSGSRSGGFSRPGGFGGSDRSGGGGFGGFGGSDRSGGFGSFGSSQSSAFGVADQNNKGRF | 632 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g00507 | 632 | Gene3D | - | 329 | 480 | IPR027417 | - | |
Aip07g00507 | 632 | CDD | SF2_C_DEAD | 334 | 451 | - | - | |
Aip07g00507 | 632 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKE | 53 | 535 | - | - | |
Aip07g00507 | 632 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 177 | 462 | IPR027417 | - | |
Aip07g00507 | 632 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 337 | 481 | IPR001650 | - | |
Aip07g00507 | 632 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 53 | 535 | - | - | |
Aip07g00507 | 632 | MobiDBLite | consensus disorder prediction | 487 | 632 | - | - | |
Aip07g00507 | 632 | SMART | ultradead3 | 122 | 325 | IPR014001 | - | |
Aip07g00507 | 632 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 134 | 308 | IPR014001 | - | |
Aip07g00507 | 632 | SMART | helicmild6 | 362 | 442 | IPR001650 | - | |
Aip07g00507 | 632 | MobiDBLite | consensus disorder prediction | 520 | 541 | - | - | |
Aip07g00507 | 632 | Gene3D | - | 104 | 312 | IPR027417 | - | |
Aip07g00507 | 632 | Pfam | DEAD/DEAH box helicase | 127 | 296 | IPR011545 | GO:0003676|GO:0005524 | |
Aip07g00507 | 632 | MobiDBLite | consensus disorder prediction | 609 | 632 | - | - | |
Aip07g00507 | 632 | CDD | DEADc | 114 | 309 | - | - | |
Aip07g00507 | 632 | Pfam | Helicase conserved C-terminal domain | 340 | 442 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g00507 | Aip-Chr7 | 4388312 | 4392091 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g00507 | 108 | 474 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.884 | 5.41e-66 | 220 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g00507 | - | - | ahf:112702088 | 950.658 |