Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00499 ATGAACAACAACAGCACTATTCCTGGTTGGAACTTTGAGAGTGATGCCTGTGTCATCAATCAAAAGAGTCCAATAGGGCTGGACCAAGATCTTGTAGAGCTTCTATGGAAAAATGGGCAAGTAGTATTGAGCAGCCAAACACAAAGGAAACCAGTTCAGAAAAGTGATGCATCATCAACATTAAGGAATGGTGTTCATTGTGGAAACTCAAGTAGTAATTTGAGTCAACAAGAAGATGAGACAGCTTCATGGATTCAATACCAAGTTGAGGATCATCCAATGGGACAAGAACTTTGCTCATCAAATCTTTTATCTCAATTGACACCTTGTGAAGTTGAGGCTTACAAGCCAATCAAGCAATTGGAAGAACCAAAGTTTGCAAAATTTGCTACCCCAAATGCAAATTTAAGTCCACAACAACAAAACAACAATATAAAACCAATAAATCCTATGCCCGCTCCAAGATTCCAGGTTGCTCCTGATTCATCTAATCAGAAAACCAATGACTTTGTTGGTGGATCATCATCATCACAAAAGGTTCCAAAGTTTTCTCATCATTTTTCAGCACCCGCACAACAAAAGTTTAGGGAGAAAGTTAATGGTAACAATAATGTGCTACAAAGTGAGGGTAGGGAGTGTTCAGTTATGACAGTTGGATCAAGTCACTGTGGCAGCAACAACATCATCCCTCAGGAACAAGATACTACTTTCTCTGAAGCAGTTAAAGATTGTGTTCAGAGAAGTGTTCCTAATTGGAGTAACAATAAGGGGAAATCTTCAGAGATGATTGAGGCAACTGTGACTTCATCTTCTGGTGGCTCAGGTAGTAGTCTTGGAAAAACTACTTGTTCTTTATCAACAGGAAATCATCTTAGCCTAAAGAGGAAAATCACAGATGCAGATGAATCAGAAGAACAAAGTGAGGCCACAGAGCCTAAATCAGGTGTTGGAAACAAAACATCTCAGAGATCAGGATCTTCTAGAAGAAACCGTGCAGCAGAAGTGCATAACCTATCTGAAAGGAGAAGAAGAGACAGGATCAATGAGAAAATGAGAACACTCCAACAACTCATACCAAACAGTAATAAGACAGACAAAGCATCAATGCTAGAAGAGGCAATTGAATACTTGAAGTCACTTCAGTTACAGCTTCAGGTAATGTGGATGGGAGCAGGGATGACACCAGTGATGTTTCCTGGGATTCAGCATTACATGTCACAAATGAGTGCAATGGGAATGGCTGCAGCATCACAACCTTCTCTTTCTTCTATGCAAAATCCAATGCAAATACCAAGAATGCCCCTTGACCAATCCAACATGCCTTCTACTGTGTCTGTGCCTCATCATCAAACACCTTCAAACCAGGCTTTGATGTGCCAAAATCCAGTTTTGGGTGCATTTAATTACCAAAATCATCAGATGCAAAATCCATGCCTTGCAGACCAATATGCACGTTACATGGCCTATCATCATCTCATGCAAACTGCATCTCAGCCAATCAATGTATTTGGACATGGTTCCCAGGCTGTTCAGCAGAGTCAAACAATGATGCCACCCAGCAATAACAATGGGACCATGAATGTTGCACCTAATTTTGAAGATGCTATCACTGCCAAAATGGGTACTTCCACCTTTCAACAACTCAACAATAACTAA 1656 0.4046 MNNNSTIPGWNFESDACVINQKSPIGLDQDLVELLWKNGQVVLSSQTQRKPVQKSDASSTLRNGVHCGNSSSNLSQQEDETASWIQYQVEDHPMGQELCSSNLLSQLTPCEVEAYKPIKQLEEPKFAKFATPNANLSPQQQNNNIKPINPMPAPRFQVAPDSSNQKTNDFVGGSSSSQKVPKFSHHFSAPAQQKFREKVNGNNNVLQSEGRECSVMTVGSSHCGSNNIIPQEQDTTFSEAVKDCVQRSVPNWSNNKGKSSEMIEATVTSSSGGSGSSLGKTTCSLSTGNHLSLKRKITDADESEEQSEATEPKSGVGNKTSQRSGSSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQLQLQVMWMGAGMTPVMFPGIQHYMSQMSAMGMAAASQPSLSSMQNPMQIPRMPLDQSNMPSTVSVPHHQTPSNQALMCQNPVLGAFNYQNHQMQNPCLADQYARYMAYHHLMQTASQPINVFGHGSQAVQQSQTMMPPSNNNGTMNVAPNFEDAITAKMGTSTFQQLNNN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00499 551 MobiDBLite consensus disorder prediction 45 79 - -
Aip07g00499 551 Pfam Helix-loop-helix DNA-binding domain 335 381 IPR011598 GO:0046983
Aip07g00499 551 Gene3D - 326 387 IPR036638 GO:0046983
Aip07g00499 551 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 394 IPR036638 GO:0046983
Aip07g00499 551 MobiDBLite consensus disorder prediction 310 328 - -
Aip07g00499 551 MobiDBLite consensus disorder prediction 297 344 - -
Aip07g00499 551 MobiDBLite consensus disorder prediction 329 344 - -
Aip07g00499 551 SMART finulus 337 386 IPR011598 GO:0046983
Aip07g00499 551 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 7 523 IPR031066 -
Aip07g00499 551 CDD bHLH_AtPIF_like 331 394 - -
Aip07g00499 551 PANTHER TRANSCRIPTION FACTOR PIF5 7 523 - -
Aip07g00499 551 MobiDBLite consensus disorder prediction 249 285 - -
Aip07g00499 551 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 331 380 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00499 Aip-Chr7 4278108 4283933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00499 9 525 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 34.457 2.17e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip07g00499 HLH 6.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00499 K16189 - gmx:100811777 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00499 07 4278108 4283933 Aip07g00499 07 4278108 4283933 ECH