Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00491 ATGAGAAATTGGGAGAAAATTGGAGTAAGACAATACAATAAATCAGAGCTTCCAAGGTTGAGATGGACACCTGAACTCCATGAACAATTTGTTGAAGCTGTTGAAAGCCTTGGTGGAAAACACAAGGCAACTCCAAAGCAAATTTTGCAGCAGATGGCAGTGAAAGGATTAAGAATTGCTCACATCAAAAGCCATCTTCAGATGTACAGAAATCTGAAGGGACATGCTTCCCTCTCAGTGGATCACTTGATGGAAGAATATCAACATGTTAAGGATCTCAAAATCACCTCCATTCCTTCACCAAAAAGATCATCGATAGTGACCAACTTAAGAGGTTCAAATTATGAAAGGAGGATTCCCATGGAAGACCTTCATCTATCAAACGGCGTTTCACAAATCAGTGAAGAAACTGATTATGATCTAAACCAGGAAGCTGAATCAAGTGGAGGCTTATTAACTTGTGACGATGAATTAAACGAAGAAGAAAATAATAATAATAATAACAGTAATAGTAGTAGAGTTATTCATCAATTTATTCCTGGTGTCTCATTCTCTTTTAACACTAGTACTGGGCCTCTAAAATTGATGATGCATAATAGTGAGAGTGGAAAACAAGACATAATGCATTTTACGACGACGACGACGACGACGATGACGACGACGACAACAGCAACAACTGCAGTTGATTCTGTTAATTCTAGTATCTTTGTACCATCATCTACCCCAAACAATAATTATATAAATTTAGACCTAAGAATATGA 762 0.3714 MRNWEKIGVRQYNKSELPRLRWTPELHEQFVEAVESLGGKHKATPKQILQQMAVKGLRIAHIKSHLQMYRNLKGHASLSVDHLMEEYQHVKDLKITSIPSPKRSSIVTNLRGSNYERRIPMEDLHLSNGVSQISEETDYDLNQEAESSGGLLTCDDELNEEENNNNNNSNSSRVIHQFIPGVSFSFNTSTGPLKLMMHNSESGKQDIMHFTTTTTTTMTTTTTATTAVDSVNSSIFVPSSTPNNNYINLDLRI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00491 253 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Aip07g00491 253 Gene3D - 17 73 - -
Aip07g00491 253 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Aip07g00491 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 211 IPR044848 GO:0003700
Aip07g00491 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 71 IPR006447 GO:0003677
Aip07g00491 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Aip07g00491 253 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00491 Aip-Chr7 4208256 4212820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00491 8 70 G2-like Transcription Factor Family AT1G14600 68.254 4.18e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip07g00491 Myb_DNA-binding 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00491 - - aip:107608315 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00491 07 4208256 4212820 Aip07g00491 07 4208256 4212820 ECH