Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00489 ATGCCCAATTTTCTCTTTTCAAGGTTAGCTTCTTCCTTTAAAACCCTAAATCTCAACAACCCCAAATCCCAATTGAATCTTCTTCAACAGCATAAATCGCATCTCATTTTCTTCAATTCACTCGCAACCAAACATACCAAACTCCCAAAAGATCACAACTTTACAATCTCCTATCTAATCGCCGAATGCGGATTCTCCCCCGAGACCGCCGCGCTTTTGTCACAAAAGGTTCAATTCAAAACCCCTGAAAAGCCAAACGCGGTCTTAGCCCTCCTCAGACAATATGGATTCTCCGATACGCAGATCGCTAAGTTCATTCAGAAGCGACCGTTGTTCCTCCTCACTGATGCGGAAAAGATCATTAAGCCCAAGCTCATGTTTTTCTCCTCCATTGGGATTCCACGTGTTCTCCTCCCAAAACTTGTGATTGAGAACCAAAACCTGTTAGCGAGGAGCTTGGAGAAGTGCCTCATTCCGCGCTATGAGGTCCTGAAGAGTGTTGTTCGAAGTGAGCAAGAAATTGTTTGTTCATTGAAGCGCGGTGCAATGGCTTTTGTGTTGTGTGATGTGATGAAGAATTTGATTCCCAACACAAAGGTTTTGAGAGATTTGGGTGTGCCTCAGAGTTCAATCTCACTGTTGGTTATGTTTCACCCGAGCGAGGCGTTTATGAATCATGAGAGGTTTGCTAAATGTGCGAAGTTGGCAAAGGAAATGGGGTTTGATCCTAACAAGTGCAATTTCATCAGTGCCGTACATGTGCTCTCGCATATGGATTGCGCCAAGATGGACCGAAAAATGAAGTCTTTGGAGAAATGGGGTTGGTCAAAAGAGGTGTCCCTTTCGTCGTTTAGAAAGTTCCCTACTTTTATGTCATATTCGCCGGAGAGGATCGAGCGGGCGATGAGATTCTTGGTGGAGGATATGGGTTGGTCTTCCGAGGACATTGCGAGGTTCCCCACAACTCTAGGATACAGCTTGGAGAAGAGGGTTATCCCTAGATGCCATGTGATTAAGGTCTTGAAATCGAAACGACTCGTCAAAGATCAGTTATGCTTGGCGACATTCATGTGTATGAAGGAGGAAGAGTTTTTGGAGGACTTTGTGACTAAGTATCTGGATCAGACTTGTAGTTGTGCATTCATTGCAAAGCTGGACATATCGATTTCACTTTTTGTGCATGGATTTGAGACTGAGTTGCAGTTCATTGAGAACTTGAGAAGGGCATTGTTTGCATAA 1239 0.4423 MPNFLFSRLASSFKTLNLNNPKSQLNLLQQHKSHLIFFNSLATKHTKLPKDHNFTISYLIAECGFSPETAALLSQKVQFKTPEKPNAVLALLRQYGFSDTQIAKFIQKRPLFLLTDAEKIIKPKLMFFSSIGIPRVLLPKLVIENQNLLARSLEKCLIPRYEVLKSVVRSEQEIVCSLKRGAMAFVLCDVMKNLIPNTKVLRDLGVPQSSISLLVMFHPSEAFMNHERFAKCAKLAKEMGFDPNKCNFISAVHVLSHMDCAKMDRKMKSLEKWGWSKEVSLSSFRKFPTFMSYSPERIERAMRFLVEDMGWSSEDIARFPTTLGYSLEKRVIPRCHVIKVLKSKRLVKDQLCLATFMCMKEEEFLEDFVTKYLDQTCSCAFIAKLDISISLFVHGFETELQFIENLRRALFA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00489 412 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 376 - -
Aip07g00489 412 PANTHER CGI-12 PROTEIN-RELATED 21 376 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 Gene3D Transcription termination factor 3, mitochondrial 170 375 IPR038538 -
Aip07g00489 412 Pfam mTERF 89 243 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 Pfam mTERF 259 365 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 246 276 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 182 207 IPR003690 GO:0003690|GO:0006355
Aip07g00489 412 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00489 Aip-Chr7 4194649 4195974 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip07g00489 mTERF 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00489 K15032 - gmx:100786641 320.472