Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00486 ATGATTCAAGTGGAACCTGGTGTAGTTGGGGTTATGGACAGTGCAAATGAAGCATCATCATCTTTAAGCTTTGTATCATCTCATTTATCAAATGGTGGTTCAAGCAATAACAATGAGAATAGTGGTGGGGGTATTGAGATTTTGAGCTTGAAGAAGCTAAGCACTAGCCTTGAGAAGTTGATGATTGATGCTGATTATGATTATAGTGATGCTGAGATTCTTGTTGAAGGTATCCCTGTGAGTGTTCATAGGTGTGTATTGGCTTCAAGAAGTCCTTTCTTTCATGAACTTTTCAAGAAAGGGAATGTTAGTAATGGCGAGGGTTCGGTTAAGGAAGGAGGAAAACCAAGGTATCTTATGTCTGAATTGGTGCCTTATGGGAAAGTTGGGCATGAATCCTTCCTTGTTTTCTTGCATTATTTATATACAGGGACCCTTAAGGCTTCACCACCAGAAGTAACAACATGTGTTGATGAAACATGTGTCCACGACGCTTGTCGCCCTGCAATCGATTATGCTTTGGAGCTCATGTATGCCTCTGCCACTTTTCAGATGAAAGAGCTTGTTTTGCTTTTTCAGCGGCGCCTTCTAAACTTTGTGGAGAAAGCTGTAGTGGAAGATGTGATTCCTGTTCTTATGGCAGCCTTCCACTGTCAACTAAGCCAGCTTCGCTTGCAATGCACTCAAAGAGTAGCAAGGTCTGATCTTGACACCACATCTTTGGAAAAGGAGTTCCCTCAGGAAGTTGTGGACGAAATCAAGTCGCTGCGAGCACAATCTGTGCTGGAATCCACACCTGAAGAAATGGAAGTGGAGACTTTGAATGAAAAGAGTATCAGGAGAATCCATAAGGCAATGGACTCGGATGATGTCGAGCTACTTAAGCTTCTTTTGAATGAGTCTAAGGTCACTCTAAATGATGCTTATGCACTTCACTATGCATGTGCCTATAGTGATTCTAAGGTTATTCAAGAGGTTCTTAATCTAGGCTTGGCTGATATTAACCTTAGAAATCCCCGAGGATATACAGTTCTTCATGTCGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAAGAAAGGGGCCAATGCATCAGATACTACTCCTGATGGACAAACAGCTCTTGTGATTTGTCAGAGGTTGACGCGGCGCAAGGATTATCATGAGGAAACCGTGCAGTGCAAGGAATCTAACAAAGACAGGCTCTGTGTTGATGTTCTTGAGCGAGAAATGAGAAGAAATTTCAAGTGTGTGACTATGTCTGATTCATCTGAGACAACTGCTGATGATTTGCATATGAAGCTGGATTACTTTGAAAATCGAGGCACTAATCGCGAAGTAGACCTGAATGAAACTCCGGCTGTTCGAACCAAAAAGATGCAACTAAGATTGCAATCCCTTCAGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCCGAGGTGCTTGACAATTTCTTGGAGGACCTCATACCAGATGTTTTCTTCCTAGAGAAGGGCTCAGAAGAAGAGCAGCGAATCAAGAAGGCGCGATTCATGGAGCTCAAAGACGATGTCCAGAAGGCGTTTCACATGGATATGGCCGAAAACAAACGCCATTCTGGCTTGTCATCATCGATGTCTTCCTCTTCTTCGTCGTCTCGCAAGGAAAGTGTTGGCCATAGAGTGGATTCAGCCTCGTTGGATACAACATCATCGACTTTGAAGCGTGCAGGCACTAATCGCGAAGTAGACCTGAATGAAACTCTGGCTGTTCGAACCAAAAAGATGCAACTAAGATTGCAATCCCTTCAGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCCGAGGTGCTTGACAATTTCTTGGAGGACCTCATACCAGATGTTTTCTTCCTAGAGAAGGGCTCAGAAGAAGAGCAGCGAATCAAGAAGGCGCGATTCATGGAGCTCAAAGACGATGTCCAGAAGGCGTTTCACATGGATATGGCCGAAAACAAACGCCATTCTGGCTTGTCATCGTCGATGTCTTCCTCTTCTTCGTCGTCTCGCAAGGAAGGTGTTGGCCATAGATTGAGGAAAAAGTGA 2091 0.4414 MIQVEPGVVGVMDSANEASSSLSFVSSHLSNGGSSNNNENSGGGIEILSLKKLSTSLEKLMIDADYDYSDAEILVEGIPVSVHRCVLASRSPFFHELFKKGNVSNGEGSVKEGGKPRYLMSELVPYGKVGHESFLVFLHYLYTGTLKASPPEVTTCVDETCVHDACRPAIDYALELMYASATFQMKELVLLFQRRLLNFVEKAVVEDVIPVLMAAFHCQLSQLRLQCTQRVARSDLDTTSLEKEFPQEVVDEIKSLRAQSVLESTPEEMEVETLNEKSIRRIHKAMDSDDVELLKLLLNESKVTLNDAYALHYACAYSDSKVIQEVLNLGLADINLRNPRGYTVLHVAARRKDPSILVALLKKGANASDTTPDGQTALVICQRLTRRKDYHEETVQCKESNKDRLCVDVLEREMRRNFKCVTMSDSSETTADDLHMKLDYFENRGTNREVDLNETPAVRTKKMQLRLQSLQKTVENGRRFFPHCSEVLDNFLEDLIPDVFFLEKGSEEEQRIKKARFMELKDDVQKAFHMDMAENKRHSGLSSSMSSSSSSSRKESVGHRVDSASLDTTSSTLKRAGTNREVDLNETLAVRTKKMQLRLQSLQKTVENGRRFFPHCSEVLDNFLEDLIPDVFFLEKGSEEEQRIKKARFMELKDDVQKAFHMDMAENKRHSGLSSSMSSSSSSSRKEGVGHRLRKK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00486 696 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 564 688 - -
Aip07g00486 696 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 12 444 - -
Aip07g00486 696 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 445 556 - -
Aip07g00486 696 Pfam Domain of unknown function (DUF3420) 235 283 IPR024228 -
Aip07g00486 696 MobiDBLite consensus disorder prediction 669 686 - -
Aip07g00486 696 CDD BTB_POZ_NPR_plant 51 200 - -
Aip07g00486 696 Gene3D Potassium Channel Kv1.1; Chain A 48 232 IPR011333 -
Aip07g00486 696 MobiDBLite consensus disorder prediction 562 577 - -
Aip07g00486 696 SMART BTB_4 69 200 IPR000210 GO:0005515
Aip07g00486 696 PANTHER REGULATORY PROTEIN NPR3 12 444 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aip07g00486 696 PANTHER REGULATORY PROTEIN NPR3 445 556 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aip07g00486 696 Gene3D - 239 413 IPR036770 -
Aip07g00486 696 Pfam NPR1/NIM1 like defence protein C terminal 570 680 IPR021094 -
Aip07g00486 696 Pfam NPR1/NIM1 like defence protein C terminal 446 548 IPR021094 -
Aip07g00486 696 Pfam NPR1/NIM1 like defence protein C terminal 382 444 IPR021094 -
Aip07g00486 696 ProSiteProfiles BTB domain profile. 69 150 IPR000210 GO:0005515
Aip07g00486 696 Pfam Ankyrin repeats (many copies) 328 378 IPR002110 GO:0005515
Aip07g00486 696 ProSiteProfiles Ankyrin repeat region circular profile. 340 368 - -
Aip07g00486 696 MobiDBLite consensus disorder prediction 661 696 - -
Aip07g00486 696 MobiDBLite consensus disorder prediction 537 554 - -
Aip07g00486 696 MobiDBLite consensus disorder prediction 536 577 - -
Aip07g00486 696 Pfam BTB/POZ domain 67 153 IPR000210 GO:0005515
Aip07g00486 696 PANTHER REGULATORY PROTEIN NPR3 564 688 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aip07g00486 696 SUPERFAMILY POZ domain 65 198 IPR011333 -
Aip07g00486 696 SMART ANK_2a 340 369 IPR002110 GO:0005515
Aip07g00486 696 SMART ANK_2a 306 336 IPR002110 GO:0005515
Aip07g00486 696 SMART ANK_2a 277 305 IPR002110 GO:0005515
Aip07g00486 696 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
Aip07g00486 696 SUPERFAMILY Ankyrin repeat 270 383 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00486 Aip-Chr7 4175469 4181199 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip07g00486 NPR1_like_C 2.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00486 K14508 - gmx:100814739 764.222