Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00484 ATGGGTATTGGAAACAAGGAAGAAGTATTGAAAGTGAAAATAAGAAAAGAGGAAGTGGTGGTAGCAGCCATGCTTCCCATGCAAGACCATTGGCTACCACTCTCAAACCTTGACCTTCTTCTTCCACCGCTTGATGTTGGTGTTTTCTTTTGCTATGATAATACAACAATGAGCTTTGGATCAATGGTGGGGTCCCTTAAGAATGCATTGTCTGAGGCTTTGGTTTCCTATTATGTCTTTGCTGGTGAGGTGGTGCAAAACTCCATGGGTGAACCTGAGATTCTTTGCAATAACCGTGGGGTTGATTTTATTGAGGCTGAGGCTGATGTTGATCTCCATAATCTTAACCTCTATAACCCTGATGAATCCATTGAAGGCAAGTTTGTTCCAAACAAGAAGCATGGCGTCCTTGCTGTTCAGGCAACTTCACTAAAGTGTGGTGGGTTAATAGTAGCATGTAGTTTTGACCATCGCATCGCAGATGCTTACAGTGCAAACATGTTTCTCGTATCATGGGCCCAACTATCGCAGCCCACAAAGCCCACCATCTTAACTCATCAACCTTGTTTTCGTCGCTCCCTCCTCAGCCCACAACGCCCCCCTTCAATCCACCCTTCAATNTATATATTTTTTTTTGTATGGATAatattaaGTTGCAACAAAAGGGTGAGTGTTGCTAAGATGGGTGTGATCGTTGATGGAAGAAGGAGACTTAGCAATGGCAAGAAGATGAAGGAAGCAATGATGAGTTCTTACTTTGGAAACGTGCTTTCCATTCCATTTGATGGCAAACCAATAAACGAGCTGGTGGAGAAGCCGCTGAGTGTGGTGGCGGAGGAGGTTCGCGAAATCGTAAAGGCAGCGGCTACGGAAGAACACTTCTTAGGACTAGTTGACTGGGTGGAAGCACTCCGGCCAATTCCAGCATTGACCCGAATTTATTGTGAAACCGGTGAAGGTCCATGTTTTGTGGTGTCTTCGGGACAAAGATTTTTCGAGTCAAAGGTTGACTTTGGTTGGGGAGAGCCTGTGTTTGCATCGTATCATTTTGCATGGGGTGGTGATTGTGGATATGTTATGCCAATGCCTAGTCCTAAAGGAAATGGTGATTGGGTGCTCTACATGCACCTCCACAATAAGCTTTTGCAATTCATAGAGTCTCATTTTTCTCATGTCTTTCAACCTTTATCTTGGGACTACCTTAATTAG 1209 0.4409 MGIGNKEEVLKVKIRKEEVVVAAMLPMQDHWLPLSNLDLLLPPLDVGVFFCYDNTTMSFGSMVGSLKNALSEALVSYYVFAGEVVQNSMGEPEILCNNRGVDFIEAEADVDLHNLNLYNPDESIEGKFVPNKKHGVLAVQATSLKCGGLIVACSFDHRIADAYSANMFLVSWAQLSQPTKPTILTHQPCFRRSLLSPQRPPSIHPSXYIFFFVWIILSCNKRVSVAKMGVIVDGRRRLSNGKKMKEAMMSSYFGNVLSIPFDGKPINELVEKPLSVVAEEVREIVKAAATEEHFLGLVDWVEALRPIPALTRIYCETGEGPCFVVSSGQRFFESKVDFGWGEPVFASYHFAWGGDCGYVMPMPSPKGNGDWVLYMHLHNKLLQFIESHFSHVFQPLSWDYLN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00484 402 Pfam Transferase family 10 202 - -
Aip07g00484 402 Pfam Transferase family 222 391 - -
Aip07g00484 402 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 224 396 - -
Aip07g00484 402 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 14 211 - -
Aip07g00484 402 Gene3D - 208 391 IPR023213 -
Aip07g00484 402 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 224 396 - -
Aip07g00484 402 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 211 - -
Aip07g00484 402 Gene3D - 10 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00484 Aip-Chr7 4160614 4163203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00484 10 386 Monolignol Biosynthesis Gene Families AT5G48930 24.201 3.64e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00484 - - aip:107606479 792.341