Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00466 ATGGTTTTGAAGAAAGTTTCTTTGGTTCTGGTTCTACTTGTCATATGCAACTCTGTTGTAGAATCCTTTTCAAGTAGGAACCATGATCTCATCAACAAGAATGGTTCCTCTCTTGCAGCCATAAAGTTCCCTAATCATCCAAGCTTCAATGCTGTGACTTCTTCTGGGGACACGGGGTGTAGCTTCACAAGTTCTGCCATGAATTTAGGTGAAGAAACCAATGATGATGATGGTGATAGTGATGATGAAGGTGAGGGTTTTCTAGAAGCAAAGCCAAACAAGGAAATGGTGAAGCTTCATTTGAGACACTCAATGAACAAAGATGATGATGATGATCTTGATTTCACATCAAGGGATTTGACCAGAATTCAAACCCTGCATAGAAGGGCCATGGAGAAGAAGAACCAAAACACCTTCTCAAGGCTGCAAAAGGCACAGGAGAAATCCAGACCAAAGTCAAAGCATCACCACAAGCCGGCCGCGGCGGCTGCGCCACCGGATTATCTTGCAAACCAGCTTGTGGCAACCTTGGCATCTGGTGTCAGTCTTGGCTCTGGAGAGTACTTCATGGATGTGTTTATTGGTACACCTCCTAAGCATTTCTCTCTAATACTAGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGTTTAGCATGTTTTGATCAAACTGGTCCTTATTATGATCCTAGAGAATCTAGTTCCTTTAAGAACATTAGCTGTAGTGATCCGCGCTGCCAATTAGTAACGTCGCCGGATCCACCTAGGCCTTGCAAGGGTAAGGATCAGAGTTGTCCATACTTCTATTGGTATGGAGATAGCTCGAATACAACCGGTGATTTCGCCCTCGAGACCTTTACAGTTAACCTCACCACGCCTTCGGGTAAATCCGAGCTAAAGCATGTGGAGAATGTGATGTTTGGCTGTGGACATTGGAATAGAGGATTGTTTCATGGGGCTGCAGGGTTGTTAGGATTGGGGAGAGGGCCATTGTCATTTGCATCTCAGCTTCAATCCCTTTATGGCCATTCATTTTCCTATTGCCTTGTGGATAGGAATAGCAATTCTAGTGTTAGCAGCAAATTGATATTTGGTGAGGATAAGGAGCTTTTAAGCCACCCTAATTTGAACTACACTTCATTTGTTGGTGGCAAAGACAATTCAGTTGATACATTTTACTATGTTCAGATCAAATCTTTGATGGTTGATGGTGAGGTGTTGGATATTCCTGAGGAAACTTGGAATTTATCAGCACAAGGTGCTGGTGGAACAATCATTGATTCTGGCACCACTTTAACTTATTTTGCTGATCCTGCTTATGAGATCATTAAGGATGCATTTGTGAAGAAAATTAAGGGATATCCAATTGTTGAAGGCCTTCCACCTTTAAAGCCATGTTACAATGTGTCTGGGATTGATCAGATGGAGCTGCCAGATTTTGGGATCTTGTTTTCAGATGGAGCAGTTTGGAACTTCCCTGTGGAGAATTACTTCATCCAGATTGATCCGGATGTCGTTTGTCTGGCGATCTTAGGGACTCCCCGGCACGCCCTTTCGATAATCGGAAACTATCAGCAGCAGAATTTCCATATCCTCTATGATATGAAGAAATCAAGGCTTGGTTATGCACCAAGGAAGTGTGCTGATTTTCACCAATACCAGGTGGTGGGTAGGGCTCTTCCCACAGAGAAAGATGAGCACCCTAAGATCTACCGCATGAAGCTTTGGGCCACCAATGAGGTTCGTGCCAAATCCAAGTTCTGGTACTTTTTGAGAAAGTTAAAGAAGGTCAAGAAGAGCAATGGGCAAGTGCTGGCCATCAATGAGATTTTCGAGAAAAATCCTACCAAGATTAACAACTATGGAATCTGGCTCCGATATCAGAGTCGCACCGGTTATCACAATATGTACAAGGAATACCGAGACACTACCCTAAACGGTGCTGTTGAACAAATGTACAATGAGATGGCGTCGCGTCATAGGGTCAGGTTTCCTTGCATCCAGATCATCAAGACGGCCACCGTCCCCGCTAAGATGTGCAAAAGGGAGAGCACCAAGCAGTTCCACAACTCTAAGATCAAGTTCCCATTGGTGTTCAAGAAGGTGAGGCCCCCAACCAGGAAGCTGAAGACAACCTACAAAGCAACCAGACCCAACCTGTTCATGTGA 2175 0.4409 MVLKKVSLVLVLLVICNSVVESFSSRNHDLINKNGSSLAAIKFPNHPSFNAVTSSGDTGCSFTSSAMNLGEETNDDDGDSDDEGEGFLEAKPNKEMVKLHLRHSMNKDDDDDLDFTSRDLTRIQTLHRRAMEKKNQNTFSRLQKAQEKSRPKSKHHHKPAAAAAPPDYLANQLVATLASGVSLGSGEYFMDVFIGTPPKHFSLILDTGSDLNWIQCVPCLACFDQTGPYYDPRESSSFKNISCSDPRCQLVTSPDPPRPCKGKDQSCPYFYWYGDSSNTTGDFALETFTVNLTTPSGKSELKHVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLQSLYGHSFSYCLVDRNSNSSVSSKLIFGEDKELLSHPNLNYTSFVGGKDNSVDTFYYVQIKSLMVDGEVLDIPEETWNLSAQGAGGTIIDSGTTLTYFADPAYEIIKDAFVKKIKGYPIVEGLPPLKPCYNVSGIDQMELPDFGILFSDGAVWNFPVENYFIQIDPDVVCLAILGTPRHALSIIGNYQQQNFHILYDMKKSRLGYAPRKCADFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKINNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATVPAKMCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATRPNLFM 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00466 724 Pfam Xylanase inhibitor C-terminal 395 545 IPR032799 -
Aip07g00466 724 Gene3D - 618 693 - -
Aip07g00466 724 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 553 674 IPR023573 GO:0003735|GO:0005840|GO:0006412
Aip07g00466 724 Hamap 50S ribosomal protein L18Ae [rpl18a]. 552 615 IPR028877 -
Aip07g00466 724 SUPERFAMILY Acid proteases 181 552 IPR021109 -
Aip07g00466 724 Pfam Xylanase inhibitor N-terminal 188 367 IPR032861 -
Aip07g00466 724 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 203 214 IPR001969 GO:0004190|GO:0006508
Aip07g00466 724 SUPERFAMILY RplX-like 617 692 - -
Aip07g00466 724 Gene3D Acid Proteases 167 368 IPR021109 -
Aip07g00466 724 PRINTS Pepsin (A1) aspartic protease family signature 194 214 IPR001461 GO:0004190|GO:0006508
Aip07g00466 724 PRINTS Pepsin (A1) aspartic protease family signature 426 437 IPR001461 GO:0004190|GO:0006508
Aip07g00466 724 PRINTS Pepsin (A1) aspartic protease family signature 521 536 IPR001461 GO:0004190|GO:0006508
Aip07g00466 724 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 23 551 - -
Aip07g00466 724 ProSiteProfiles Peptidase family A1 domain profile. 188 545 IPR033121 -
Aip07g00466 724 Coils Coil 128 148 - -
Aip07g00466 724 MobiDBLite consensus disorder prediction 128 165 - -
Aip07g00466 724 CDD pepsin_A_like_plant 187 549 IPR034161 -
Aip07g00466 724 Gene3D - 551 617 - -
Aip07g00466 724 MobiDBLite consensus disorder prediction 64 89 - -
Aip07g00466 724 Gene3D Acid Proteases 369 550 IPR021109 -
Aip07g00466 724 PANTHER ASPARTYL PROTEASES 23 551 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00466 Aip-Chr7 3958866 3965796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00466 552 724 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 92.486 4.06e-115 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00466 K22683 - zju:107416111 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00466 07 3958866 3965796 Aip07g00466 07 3958866 3965796 ECH