Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00456 ATGGCTAATGAAGATAAAGATCAATTTCACTTTGACCCTTTCTATTACAACAATCATGAACTCAACCAATCAAACTTTCCCTTGTTTAGAATGATTACTACTTCTTCTTCATCTCATCATCATCAAGAAGGGTTTATTGATAACAACACTACAAGTTTCACTGATTGTTTGTTACATGGTAATTCCATGGATTATAACACTCTCTCTAGAGCCTTTGACTTGTCTTGTTCTTCACCTGAAGTCATCTCATCATCCATTGATGAAAACAAGAATCAACTACCATCAACTGTTGTTGGTGGAGACTCAACAACACTCAATTCCTCAGTTTCTTCTTCATCTAATGAAGCTGATGCTTCACTCACTGAAGAAGACTCATCATCCAAAAGTACCAAGAAACATGAGAAGCAACCAAAAGGGTGTGAAGAAGAAGAAGAAGATGAAGATGCAAAGTCTAAGAAAGAGAATAATAACAATAAGCCAAAGAAGAAAGAGAAAAAGCCAAGAGAGCCACGCTTTGCATTCATGACCAAAAGTGAGATTGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCAGTCAAAAATAGTCCATATCCAAGGAGTTATTATAGATGCACTACTCAGAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATACCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAGCACAACCACCACTGCCCGGCGACGCTCCGCGGCAGCGCCGCCAGCGTGTTTGCTTCTTCACCTTCCCTTTTTGCTTCCACATCCCTAATAAGGCCAACAAGTTTCCCCCAAGATTTCCTCTCTCAATTGCTTCCAACTTACACTACTAACAATAGTAGCACCCATCAACCACTAATAAATAATAATAATCACCATCAAAACCCTATTTTCCAATTAAACCTTGGCCATAATCCTCATTATCCTCCTCCTCCACCGCCACCACAAGAGCATCATCATCATCTTCAATTCCCTCATGACTATGGCTTGTTGCAAGACCTACTACCTTCATTCCCAGGCAAACAAGAACCTTAA 1062 0.3983 MANEDKDQFHFDPFYYNNHELNQSNFPLFRMITTSSSSHHHQEGFIDNNTTSFTDCLLHGNSMDYNTLSRAFDLSCSSPEVISSSIDENKNQLPSTVVGGDSTTLNSSVSSSSNEADASLTEEDSSSKSTKKHEKQPKGCEEEEEDEDAKSKKENNNNKPKKKEKKPREPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPSIVITTYEGQHNHHCPATLRGSAASVFASSPSLFASTSLIRPTSFPQDFLSQLLPTYTTNNSSTHQPLINNNNHHQNPIFQLNLGHNPHYPPPPPPPQEHHHHLQFPHDYGLLQDLLPSFPGKQEP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00456 353 Pfam WRKY DNA -binding domain 184 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00456 353 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 26 303 - -
Aip07g00456 353 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 303 IPR044810 GO:0003700
Aip07g00456 353 SMART WRKY_cls 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00456 353 MobiDBLite consensus disorder prediction 87 174 - -
Aip07g00456 353 Gene3D WRKY domain 168 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00456 353 MobiDBLite consensus disorder prediction 87 120 - -
Aip07g00456 353 ProSiteProfiles WRKY domain profile. 178 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00456 353 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00456 353 MobiDBLite consensus disorder prediction 310 331 - -
Aip07g00456 353 MobiDBLite consensus disorder prediction 121 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00456 Aip-Chr7 3876140 3878830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00456 1 353 WRKY Transcription Factor Family AT4G18170 42.500 1.21e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g00456 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00456 - - adu:107496496 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00456 07 3876140 3878830 Aip07g00456 07 3876140 3878830 ECH