Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00453 ATGGTAGTTGAGGCTCAAGTTCCTCTACTTGAGTGTGTAATGAACGTTGTGAATGAAGATTATCCAGGTTCAGTAGTTGATGAACATTGTGAAATGAAGAAGCAGTGGAATCAGAAACTCCAATCTCCCTCAGGGGACAACTTGGTATCAGTAGGGGAACTTTGGACTGATGGACTAATCTGTGCCTTTGAGTTCATCAAGGGAGTTAGAGATGTGGCAAAGAAAAGATTTGAAGGAAGAAAGTTTAGTAGGAATGGCTGTGTTGATTCACCCCCAACTTTGCTAGATCAATCTGGAACTGGTGGTCTTGATGATGGTTTAGATGATTATCACCAATCACCTCATCAATTCATTGGCAAAGAGGGTCTTCCTAGAAGTTACTGGAGGCCAATTGGTTGGTCTAGGATCTCCGAACTTGTGCAGGCAGTGCGAACTGATGATGGTTGGGCCTCACAGCTGCTTGATTTCACAGATGATGAGATTGATGTTGCTGTTGCTGATGTTGCAACTCCTTACTGGGAAAGGCCTGTTGGTCCAACATGGTGGTGTCATTTGGATGCAAGCCATCCATTTGTTGTTACATGGTTGGGTAATTCTCATTGGTTACATCCTGCTATTAGCATAGCTTTGAAAGATGAAAGTAGATTAATAAGTGAACGAATGAAGCACCTTTTATATGAGGTTCCAGTCCGAGTCGCTGGCGGTCTGCTATTTGAACTTCTGGGGCAGTCAGCTGGTGATCCTTTAGCAGAGGAAGATGACATACCTGTTGTACTCCGATCATGGCAGGCGCAAAACTTTTTAGTTACAGCCATGCATGTAAAGGGTTCTGCATCAAACATAAATGTATTAGGCATTCTAGAAGTTCAGGAGCTGCTTGCTGCTGGAGGTGCTAACATTCCGCGCACCATTCATGAAGTTGTAGCACACTTAGCTTGCCATCTTGCACGATGGGACGATAGGTTGTGGCGTAAACACATCTTTGGGGCTGCAGATGAAGTTGAGTTGATGTTTATGAACAGGAGAAACCATGAGGATTTACATCTATTCACAATAATATTGAACCAGGAAATTAGAAGATTATCGACCCAGGTTATAAGAGTGAAATGGTCGCTCCATGCGCGAGAGGAAATTGTTTTTGAACTTCTTCAACAGTTGAGAGGGAATACAACAAGAGCCTTGCTGGAAGGAGTAAGAAAGAGTACTAGGCAAATGATTGAGGAGCAAGAAGCAGTTCGAGGACGGTTGTTCACCATACAAGATGTCCTGCAAAGCACAGTCCGTGCATGGTTGCAGGATAAAAGCCTCACAGTTACGCATAACCTTGGAATATTTGGGGGTTGTGGCCTTGTTCTTTCCATCATCACCGGACTATTTGGTATAAACGTTGACGGAATACCTGGAGCCGAAGGAACTCCTTATGCGTTTGTGAGAAAGCTGGAGCTTGAAGAGCTGGTCAGGATGTTTCAACATGAAGCAGAAACTCATGCTCAAGTGCGAAAAACAGGTCCTCAGATGGATGTTCCACCAACTGCAGAAGTTAGGGGGGCACCAAGTGGTGCAAATAATCGCTCTGTTTTCTCAAGCAAAGGAGAAGAAGCACATTCACCACCAAGCACACGAACATCACACCATGAACTATGTCTCCATGATCATGCTCTTACTGCTCCATCACTGAGCCAATCCACATCTCCTTATATAAACCTCTTAGAAAACTTGAGCATCACAAAAAGGATGACTGCACATCGCTCACGTTCTGCACCGGCCGTACTATTCACCGACACTGGCATAGACTTTCATGAGCCCTCTGAACCTAGACCTATACAAAATTCATCAACCTTAATGGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTGGCAATTGGTGTTGCAGTGTACATGATAAATGGGAGTTTCAAGGGTACCACCACACTTAAGCTTATAGATGCTATTTACTTCACAGTAGTAACTCTAAGCACAATTGGATTTGGAGATATTGTTCCTGATGCAACATCTACCAAGATCTTTACCTGTGGTTTCATTTTGGTTGGTTTTGGACTTACTGGTTTTCTCCTCAGCGGCTTGGTTGAATACATCTGTGATACTCAAGAAGCATTCACGTTGAGCATGATGGATGAGAATAGATATAAGAGAATTCTCTGGACTTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTGGTTGTCATCGTCTGCATCGCAACAGGAGCAGTCACAGCTCACTTTCTAGAGGGTATGGATTGGATAGACAGTTTCTATCTCTCCATTACGTCTGTTACGACAGTTGGTTATGGCGATTATGCTTTCAAAACTGTAACTGGAAGATGCTTCGCGATTATCTGGCTTTTGGTAAGTACATTGGCAGTTGCTAGGGCCTTTCTGTACCTAACTGATTATAGCATGCACAAGAGGAAACGTAAGGTAGCAAAATTGGTTCTTCATAAGAAGATAACTATGTCAGATTTAGTAGCTGCAGACCTTGATAATGATGGATCAATAAGCAAGTCCGAATTTCTTATCTACAAGCTCAAGGAAATGGGAAAAATAACTGAGATTGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGGTTGTGGCATCTATGGCAAGATTAGTGTTGCTGACCTTATGGTAAATGTCTAA 2697 0.426 MVVEAQVPLLECVMNVVNEDYPGSVVDEHCEMKKQWNQKLQSPSGDNLVSVGELWTDGLICAFEFIKGVRDVAKKRFEGRKFSRNGCVDSPPTLLDQSGTGGLDDGLDDYHQSPHQFIGKEGLPRSYWRPIGWSRISELVQAVRTDDGWASQLLDFTDDEIDVAVADVATPYWERPVGPTWWCHLDASHPFVVTWLGNSHWLHPAISIALKDESRLISERMKHLLYEVPVRVAGGLLFELLGQSAGDPLAEEDDIPVVLRSWQAQNFLVTAMHVKGSASNINVLGILEVQELLAAGGANIPRTIHEVVAHLACHLARWDDRLWRKHIFGAADEVELMFMNRRNHEDLHLFTIILNQEIRRLSTQVIRVKWSLHAREEIVFELLQQLRGNTTRALLEGVRKSTRQMIEEQEAVRGRLFTIQDVLQSTVRAWLQDKSLTVTHNLGIFGGCGLVLSIITGLFGINVDGIPGAEGTPYAFVRKLELEELVRMFQHEAETHAQVRKTGPQMDVPPTAEVRGAPSGANNRSVFSSKGEEAHSPPSTRTSHHELCLHDHALTAPSLSQSTSPYINLLENLSITKRMTAHRSRSAPAVLFTDTGIDFHEPSEPRPIQNSSTLMVRVSFISVFLYLAIGVAVYMINGSFKGTTTLKLIDAIYFTVVTLSTIGFGDIVPDATSTKIFTCGFILVGFGLTGFLLSGLVEYICDTQEAFTLSMMDENRYKRILWTYIVDEEKGRMRIRTKVSLALVVVIVCIATGAVTAHFLEGMDWIDSFYLSITSVTTVGYGDYAFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRKVAKLVLHKKITMSDLVAADLDNDGSISKSEFLIYKLKEMGKITEIDILQISKQFDSLGCGIYGKISVADLMVNV 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00453 898 Pfam Ion channel 745 816 IPR013099 -
Aip07g00453 898 Pfam Ion channel 622 700 IPR013099 -
Aip07g00453 898 Gene3D - 726 839 - -
Aip07g00453 898 Gene3D - 605 721 - -
Aip07g00453 898 SUPERFAMILY Voltage-gated potassium channels 614 700 - -
Aip07g00453 898 SUPERFAMILY Voltage-gated potassium channels 713 834 - -
Aip07g00453 898 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 8 477 - -
Aip07g00453 898 ProSitePatterns EF-hand calcium-binding domain. 843 855 IPR018247 -
Aip07g00453 898 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 478 529 - -
Aip07g00453 898 MobiDBLite consensus disorder prediction 496 544 - -
Aip07g00453 898 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 478 529 - -
Aip07g00453 898 PRINTS Two pore domain K+ channel signature 657 685 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aip07g00453 898 PRINTS Two pore domain K+ channel signature 777 786 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aip07g00453 898 MobiDBLite consensus disorder prediction 521 536 - -
Aip07g00453 898 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 8 477 - -
Aip07g00453 898 SUPERFAMILY CorA soluble domain-like 176 427 IPR045861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00453 Aip-Chr7 3846461 3851556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00453 582 895 Ion Channels AT4G18160 50.629 5.46e-96 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00453 - - adu:107496492 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00453 07 3846461 3851556 Aip07g00453 07 3846461 3851556 ECH