Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00452 ATGGATAGAAAGCAAGAACAAGAAAAAGGTAACCTGAATAATAATAATAACAATAATAATAATAATAAGTCTGGCATTGATGTTACTCTAATATCTGCCACCACCAAAGTTCCAAAAGCAGTTTCGCCGGTTTCCTCTGCTGCCGAGGGGGAAGCCTTAAGGCGGCCGCGTGGCAGGCCTGCCGGCTCCAAGAACAAGCCGAAGCCACCAATAATTGTGACAAGGGACAGTGCTAATGCACTCAAGGCTCATGCTATGGAAGTAAGCTCTGGCTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGGAAGCAGAGAGGCCTCTGCATACTAAGTGGAACTGGCTGTGTGACAAATGTAACTCTGCGCCAACCGGCCTCATCCGGCGCCATTGTGACTCTTCACGGCCGATTCGAGATCCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACTGGCCTCACCATTTACTTGGCTGGTGCTCAGGGGCAAGTTGTAGGAGGTGCTGTTGTTGGTGCCTTGATTGCCTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTCGATCGCCTGCCATTGGAAGACGAAGAACTCACGGCTGCAATGCAGAATCAGCATTACCAAAACGGACGCACCACACATCATCTCGATATCTCAGACTTGTATGCAATGCCACAGAACCTTCTCACCAATGGAACAATGGCACCAGAGATATATTCTTGGGCACCAGGGAGGAACTTGTCAAAAAGCTGA 783 0.4917 MDRKQEQEKGNLNNNNNNNNNNKSGIDVTLISATTKVPKAVSPVSSAAEGEALRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDEELTAAMQNQHYQNGRTTHHLDISDLYAMPQNLLTNGTMAPEIYSWAPGRNLSKS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00452 260 MobiDBLite consensus disorder prediction 10 41 - -
Aip07g00452 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 193 IPR005175 -
Aip07g00452 260 Gene3D - 80 225 - -
Aip07g00452 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 13 259 - -
Aip07g00452 260 CDD DUF296 84 164 IPR005175 -
Aip07g00452 260 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Aip07g00452 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 209 - -
Aip07g00452 260 MobiDBLite consensus disorder prediction 1 71 - -
Aip07g00452 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 259 IPR014476 GO:0003680
Aip07g00452 260 PIRSF ESCAROLA 1 256 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00452 Aip-Chr7 3838398 3839180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00452 1 259 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.667 2.15e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00452 - - vra:106765118 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00452 07 3838398 3839180 Aip07g00452 07 3838398 3839180 ECH