Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00428 ATGTCTGTGGACATGATCTATGATGTTCTATTATTGATCCTGTTACCAATCCTTCTTGTGATAGTCTCGTTCAATTTCTTGCGACACAAGCAAGGTTGCAAAAGAGAAAAGAAGCGGCTTCCACCAGGGGACATGAAGTTCCCGTTGATTGGTGAGACAATGGAGTTCTTCAATGCTCAGAGGAGGAATCAATTGTTCGAGAAATTCGTCCAGCCGCGAGTTCTAAAGTACGGAAAGATCTTCAAAACAAGAATAATGGGGTCTCCAACCGTGGTTGTGAATGGTTCTGAAGCAAACAAATTCTTTCTAACCAATGAGTTTAAGTTGGTGAAGAGTTCTTGGCCTTCTTCTTCTGTTCAGCTCATGGGAACTGATTCAATTATGGAGAAAGACGGCGAAAGGCATCGATTCCTTCGCGCCTTGATTGGAACTAGCCTTAGCTATGCAGGACTAGAAAATCTAGTTCCAAAACTATGCAACCATGTTAGATTCTTCTTGGAATCTAAATGGCAGGGTCATGGAAACACAATTAGTCTTTACCGGTCCACCAAAATCCTAACTTTTAGCATAGTTTTCGAGTGCTTGTTGGGAATTAAAGTGGAACAGGGGATGCTAGAGACATTTGAGAGAGTTCTAGAAGGGGTGTTTTCGCCGGCAATTATGTTCCCTGGCTCAAGGTTTTCAAGGGCGAAGAAGGCAAGGATGGAGATAGAAAAGGCTCTTACCAAAGCAGTTAGAGAGAAAAGAAAGGAGATGGAAGAGAATTTGCAGAATGAGAAAGATGGAATGCTTCTTTCAAAATTGGTCAATGGATTGATGCATGGTGAGATTAACGAGAAAGAGGTCATTGATAATGTGGTGTTGTTGGTTTTTGCAGCTCATGATACAACTTCTTTTGCCATTGCTATGACTTTCAGGATGCTTGCAGAGCATCCTGAATGCTATAGAAAGTTACTTCAAGAACATGTCGATATAGCGAACAACAAAAGAAGAGAGGAAAATTTATCGATAAACGATGTAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCTATTTTTGGCTCTTTTAGGAAAACAATTACTGATATTGAATATGAGGGATATACCATACCTAAAGGATGGAAGGTGCTATGGACAACGTATGGGACACATTACAATGAAGAGTATTTTAAGGAGGCTCAAAGTTTCAAGCCAAGTAGGTTTGATGAAGAAATACCACAATATGCATTTGTTCCATTTGGAGGAGGACCAAGAGTGTGTGCGGGGTATCAATTAGCAAAGATCAATATACTAATTCTTGTGCATTATGTTGTGACAAAATATGAGTGGTTCTTACTTCATCCACAGGAACCAATCATCATGGATCCTCTTCCATCCCCATCCCTTGGAATGCCAATTAGAATTTTTCCCAAGCAAAATTAA 1446 0.4011 MSVDMIYDVLLLILLPILLVIVSFNFLRHKQGCKREKKRLPPGDMKFPLIGETMEFFNAQRRNQLFEKFVQPRVLKYGKIFKTRIMGSPTVVVNGSEANKFFLTNEFKLVKSSWPSSSVQLMGTDSIMEKDGERHRFLRALIGTSLSYAGLENLVPKLCNHVRFFLESKWQGHGNTISLYRSTKILTFSIVFECLLGIKVEQGMLETFERVLEGVFSPAIMFPGSRFSRAKKARMEIEKALTKAVREKRKEMEENLQNEKDGMLLSKLVNGLMHGEINEKEVIDNVVLLVFAAHDTTSFAIAMTFRMLAEHPECYRKLLQEHVDIANNKRREENLSINDVKKMKYTWQVARESMRLFPPIFGSFRKTITDIEYEGYTIPKGWKVLWTTYGTHYNEEYFKEAQSFKPSRFDEEIPQYAFVPFGGGPRVCAGYQLAKINILILVHYVVTKYEWFLLHPQEPIIMDPLPSPSLGMPIRIFPKQN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00428 481 Pfam Cytochrome P450 41 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 SUPERFAMILY Cytochrome P450 36 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Aip07g00428 481 PANTHER CYTOCHROME P450 26 18 478 - -
Aip07g00428 481 Gene3D Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 18 478 - -
Aip07g00428 481 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00428 481 Coils Coil 230 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00428 Aip-Chr7 3674264 3676144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00428 40 384 Cytochrome P450 AT2G42850 63.768 3.90e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00428 - - gmx:100793336 764.607