Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00419 ATGGAAACCAAGAAGCTTCAGCGCCGTTTCTCACTCGGCAGACAATCCTCCATGGCGCCGGACCGCTCCTCCAAAGACGGCGGCGATGACTTCGGCTCCGAGGCAGTTGACGAATCCGTGCGGCTGATGTACCTTGCCAACGAAGGTGACTTGGAAGGGATTAAGGAGCTGTTAGATTTCGGCAGTGACGTCAACTTCAGGGACATTGACGGCCGCACCGCCCTCCACGTCGCCGCCTGCCAGCGCCGCACCGACGTCGTTGACTTGTTGCTACAAAATGGAGCTGAGGTTGACCCCAGGGACCGCTGGGGCAGCACGCCTTTAGCTGATGCAATGTACTATAAAAATCATGATGTTGTAAAGCTTTTGGAGAAACATGGTGCAAAACCCCCGGTTGCTCCTATGCATGTCCAAAATGCTCGTGAAGTCCCCGAATATGAGATTGATCCTAAAGAACTCGATTTTACAAATAGTGTTGGGATAACCAAGGGAACTTTCCGTATTGCATTGTGGCGTGGAATTAAGGTTGCTGTCAAAACTCTTGAGGAGGAAGTGTTCACTGATGATGATAAAGTGAAGGCATTTCACGATGAGCTTGCGTTACTTCAGAAAGTTCGGCATCCAAATGTAGTTCAGTTTTTAGGTGCTGTAACACAAAGCACCCCGATGATAATTGTCACGGAATATTTGCCACAGGGAGATCTTCGCACTTACTTGAAGCGGAAAGGTGCATTTAAACCAGGAATAGCTGTAAAATTTGCACTTGATATAGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAACCTCCAAATATTCTTCGGGATGATTCTGGGCATCTGAAAGTTGCTGACTTTGGAGTCAGCAAGTTGCTGAAATTTGCAAAAACAGTCAAAGAAGACAAACCAGTGACAAGCCAGGATACGTCATGGCGCTATGTTGCTCCAGAGGTTTACAAGAATGAGGAATATGACACTAAAGTAGATGTGTTTTCATTTGCTCTAATACTACAGGAGATGATTGAAGGTTATCCACCATTTTATGCAAAGTCAGAAAATGAAGTTCCTAAAGCATATGTTGAAAATGAACGTCCGCCATTTAAAGCTTCACCCCAGCTTTATGCTTATGGACTTAGGCAGTTAATAGAGGAATGTTGGGATGAAAAACCTTACAGAAGACCAACATTTAGCCAAATAATTGGGAGATTAGAAGACATCAACTACCATCATGATCAAAAGAAGCGTTGGAAGGTTCAGACTCCTACATGCATTCAGCGTCTGGAGGCCCTGTTTAGAGGGTATCGCACAAGCCCGAATAGCCGATCATCTCGCTCTACGCCAAGATAA 1374 0.4541 METKKLQRRFSLGRQSSMAPDRSSKDGGDDFGSEAVDESVRLMYLANEGDLEGIKELLDFGSDVNFRDIDGRTALHVAACQRRTDVVDLLLQNGAEVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPVAPMHVQNAREVPEYEIDPKELDFTNSVGITKGTFRIALWRGIKVAVKTLEEEVFTDDDKVKAFHDELALLQKVRHPNVVQFLGAVTQSTPMIIVTEYLPQGDLRTYLKRKGAFKPGIAVKFALDIARGMNYLHEHKPEAIIHRDLEPPNILRDDSGHLKVADFGVSKLLKFAKTVKEDKPVTSQDTSWRYVAPEVYKNEEYDTKVDVFSFALILQEMIEGYPPFYAKSENEVPKAYVENERPPFKASPQLYAYGLRQLIEECWDEKPYRRPTFSQIIGRLEDINYHHDQKKRWKVQTPTCIQRLEALFRGYRTSPNSRSSRSTPR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00419 457 Gene3D Phosphorylase Kinase; domain 1 146 230 - -
Aip07g00419 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Aip07g00419 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Aip07g00419 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Aip07g00419 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Aip07g00419 457 MobiDBLite consensus disorder prediction 1 32 - -
Aip07g00419 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Aip07g00419 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Aip07g00419 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Aip07g00419 457 SUPERFAMILY Ankyrin repeat 41 132 IPR036770 -
Aip07g00419 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 440 - -
Aip07g00419 457 Pfam Protein tyrosine and serine/threonine kinase 172 411 IPR001245 GO:0004672|GO:0006468
Aip07g00419 457 Gene3D Transferase(Phosphotransferase) domain 1 231 451 - -
Aip07g00419 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Aip07g00419 457 Gene3D - 3 145 IPR036770 -
Aip07g00419 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Aip07g00419 457 ProSiteProfiles Protein kinase domain profile. 148 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00419 457 PIRSF ILK 2 436 - -
Aip07g00419 457 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 440 - -
Aip07g00419 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Aip07g00419 457 SUPERFAMILY Protein kinase-like (PK-like) 171 432 IPR011009 -
Aip07g00419 457 CDD STKc_MAP3K-like 169 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00419 Aip-Chr7 3552779 3556884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00419 1 427 MAP Kinase Kinase Kinase AT4G18950 66.204 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Aip07g00419 PK_Tyr_Ser-Thr 3.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00419 - - gmx:100795964 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00419 07 3552779 3556884 Aip07g03317 07 122339562 122347130 PCT