Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00408 ATGCAGATTTTTGGCCAAAACCCACATCGGATAGTCGAGGGTTATTCCGAGGAGTTTGAGACATCTTTCCTTGAGCACATGAAGCGCAGCCATCGGTTCAGCCGCATTGCTGCCACCGTGGTTTATAATGAGTACATCAATGACAGGCATCATGTTCATATGAACTCCACTCAGTGGGCAACTCTTACAGAGTTTGTCAAGTACTTGGGTCGAACGGGGAAGTGTAAGGTCGAGGAAACACCTAAGGGTTGGTTCATTACGTATATAGATAGAGATTCTGAGACCCTTTTCAAGGAGAGGTTGAAGAATAAGAGGATCAAGGCAGATATGGTGGAGGAAGAGAAGCAAGAGAAGGAGATTATGAAACAGATCGAAAAAGCTGAGCAATTGATGCAACGGTCAGATACCACTGAGGCTGATCAGGCTTCAAGGGTCGAGGCTCCGAGGGAACTAAATGTGGAAGATGGAGTTAAGATAGGATTTTCTCTTGGGGCATCGGCTAAGCCTGTGATCAAAGAGAAACACGAGTCATCGAAGAAGGCTGTGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATCCAGGAAATAGTTTGAAGAGAAAAGAGAGTGGTGGTGGAGGAAAGTCAACCTTGGAAGAATTGATTAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCATGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGAAATGCTTGAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGAGTGGATACGGATCATTTTTGCGCAAAGGTGCAGATAGAGAAAGGTGCCTATGATGGCAGGGTACTCAAAGCTGTGGAATACGAAGACATTTGTAAAATAGCACAATGA 1047 0.4432 MQIFGQNPHRIVEGYSEEFETSFLEHMKRSHRFSRIAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRIKADMVEEEKQEKEIMKQIEKAEQLMQRSDTTEADQASRVEAPRELNVEDGVKIGFSLGASAKPVIKEKHESSKKAVFDEDEEDKYKERNPGNSLKRKESGGGGKSTLEELIREEEKKKEKINRKDYWLHEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQEELETVIPQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIEKGAYDGRVLKAVEYEDICKIAQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00408 348 MobiDBLite consensus disorder prediction 170 214 - -
Aip07g00408 348 Gene3D - 7 107 IPR038254 -
Aip07g00408 348 PANTHER BNAA05G13760D PROTEIN 1 347 - -
Aip07g00408 348 Coils Coil 210 230 - -
Aip07g00408 348 Coils Coil 101 133 - -
Aip07g00408 348 Gene3D - 291 347 IPR014722 -
Aip07g00408 348 MobiDBLite consensus disorder prediction 170 200 - -
Aip07g00408 348 SMART Kin17_mid_2 1 125 IPR019447 -
Aip07g00408 348 Pfam Domain of Kin17 curved DNA-binding protein 1 124 IPR019447 -
Aip07g00408 348 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 347 IPR037321 -
Aip07g00408 348 MobiDBLite consensus disorder prediction 129 149 - -
Aip07g00408 348 CDD KOW_KIN17 293 346 IPR041995 -
Aip07g00408 348 Pfam KN17 SH3-like C-terminal domain 229 282 IPR041330 -
Aip07g00408 348 SMART kow_9 290 317 IPR005824 -
Aip07g00408 348 Gene3D - 237 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00408 Aip-Chr7 3467391 3468437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00408 1 347 C2H2 Transcription Factor Family AT1G55460 67.857 3.48e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00408 K13102 - gmx:100785931 580.867