Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00368 ATGAGCTTCTTTGCATGTTGCACATCACAACATAGGTTCCATAAGAAAACTTTGAAGAAGAAAATTAAGAGCTATCATGAAGGGAAACCTGTACCATCAATATTTGCCAATTTCTCTCTCAAAACTGATAGTAGCAAGCGAAATTTCATCGAAGGCGAAATAGAAAAACTTGGAAGAGGAAATTTAACCTCTCAGATTTTTACTTATTCCGAGCTATGCTTCGCAACCCGGAACTTTCACCCTGACTACATGATTGGTGAAGGAGGCTTTGGAAGAGTATACAAAGGATTCCTTAAAGGAACTAATCAGGTTGTTGCTGTGAAGCAACTTAATAGGAATGGATTTCAAGGAAACAGAGAATTTATAGTAGAGGTTTTGATGTTAAGCCTCTTGCATAATCCTTACCTTGTTAATTTAGTAGGGTATTGTGCTGATGGTGATCAAAGAGTTCTTGTGTATGAGTACATGGTTAATGGTTCTTTAGAAGATCATCTTTTTGATCTACCTCCAGACAAAAAGGCTTTGGATTGGAGCACAAGAATGAAAATTGCAGAAGGTGCTGCTAGAGGACTTGAATATTTACACGAAGTAGCAAATCCGCCGGTTATATATCGCGATTTCAAGGCATCAAACATACTTTTGGATGAGGATTTCAATCCAAAGTTATCAGATTTTGGACTAGCAAAACTTGGTCCGACCGGCGATAAAACTCATGTGTCAACAAGGGTGATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCCTCCACAGGACAATTGACAACAAAATCTGATGTATATAGTTTTGGTGTTGTGCTTTTGGAGATGATCACAGGTAGAAGAGTCATTGATCATATGAGACCATCAGGGGAGCAAAACTTAGTTACTTGGGCATACCCACTACTCAAAGACAGAAGAAAGTTTACACTAATGGCTGATCCATTGCTAGAAGGGAGATACCCTATAAGGGGTCTGCACCAAGCAATAGCAATAGCAGCAATGTGTCTTCAGGAAGATGCTGAATTAAGGCCTTTGATTAGTGATGTAGTTACAGCTCTTAATGTATTAGCAAGGAAGAATGTAGAATGGAGTGATAACAATAATAATAGTAATAATTCAGTTGAGAGAATGATTTTAATAGATTAG 1146 0.3805 MSFFACCTSQHRFHKKTLKKKIKSYHEGKPVPSIFANFSLKTDSSKRNFIEGEIEKLGRGNLTSQIFTYSELCFATRNFHPDYMIGEGGFGRVYKGFLKGTNQVVAVKQLNRNGFQGNREFIVEVLMLSLLHNPYLVNLVGYCADGDQRVLVYEYMVNGSLEDHLFDLPPDKKALDWSTRMKIAEGAARGLEYLHEVANPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVLLEMITGRRVIDHMRPSGEQNLVTWAYPLLKDRRKFTLMADPLLEGRYPIRGLHQAIAIAAMCLQEDAELRPLISDVVTALNVLARKNVEWSDNNNNSNNSVERMILID 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00368 381 Pfam Protein kinase domain 83 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00368 381 Gene3D Phosphorylase Kinase; domain 1 64 155 - -
Aip07g00368 381 PANTHER OS07G0668900 PROTEIN 1 376 - -
Aip07g00368 381 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 376 - -
Aip07g00368 381 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Aip07g00368 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Aip07g00368 381 SUPERFAMILY Protein kinase-like (PK-like) 62 353 IPR011009 -
Aip07g00368 381 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Aip07g00368 381 CDD STKc_IRAK 85 354 - -
Aip07g00368 381 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00368 Aip-Chr7 3225185 3227999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00368 61 357 Glycoside Hydrolase AT3G07070 71.717 5.16e-159 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aip07g00368 Pkinase 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00368 - - gmx:100798032 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00368 07 3225185 3227999 Aip01g00141 01 1459141 1461660 ECH
Aip07g00368 07 3225185 3227999 Aip07g00368 07 3225185 3227999 ECH
Aip01g00141 01 1459141 1461660 Aip07g00368 07 3225185 3227999 PCT