Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00349 ATGGAGAATCATGTAGCTAAAGAATTGGAAGCAATGCTGAAGGAGGCACAACCTTCGTTTACAACCAAAAGCTGCTGTATTTACACTTCAGTGGCTAAGTTATTCAGAGATGTTGATAAGAATACTATACTGATAAATTATAATGTCAATTCTCTCAAAATTTGTGATGATTTGAATGCTTTCTACAAACATCCCTGCCGCACTAAAATAGCAACTCTGAGACGCGATTATTTCACCACTCCATGGAAGACAGCAACTTCTATTGCTGGAATTCTATTGCTCTTTCTTACTGTTATTCAGACTGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGATGGTTCTGTTGGAAAAAATCACCAGGATTTGGTTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGAATTTGATTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACGGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCGGTTGTGGCGGTTAAGAGGATCTTGGAATATGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTAGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGCAAAAGTTGAAGAAATTGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGTTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGCGATATATTTATCGTTCAAATTGGGATTAGGGTTTATCCACTCTAA 1053 0.4065 MENHVAKELEAMLKEAQPSFTTKSCCIYTSVAKLFRDVDKNTILINYNVNSLKICDDLNAFYKHPCRTKIATLRRDYFTTPWKTATSIAGILLLFLTVIQTVQHKLVSIDGNASHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYPQGDGSVGKNHQDLVFGLTGAGVALLVMSCLLGVYVWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNTGSIWFKIDELEKATDNFSTKNFIGRGGFGLVFKGVLSDGSVVAVKRILEYDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVQKLKKLLTWPQRKSIILDVAKGLAYLSCDACVHGDIFIVQIGIRVYPL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00349 350 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 308 336 - -
Aip07g00349 350 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 101 304 - -
Aip07g00349 350 Pfam Plant protein of unknown function 30 96 IPR004158 -
Aip07g00349 350 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Aip07g00349 350 Pfam Protein tyrosine and serine/threonine kinase 240 338 IPR001245 GO:0004672|GO:0006468
Aip07g00349 350 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 101 304 - -
Aip07g00349 350 SUPERFAMILY Protein kinase-like (PK-like) 217 338 IPR011009 -
Aip07g00349 350 Gene3D Phosphorylase Kinase; domain 1 207 310 - -
Aip07g00349 350 ProSiteProfiles Protein kinase domain profile. 237 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00349 350 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 308 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00349 Aip-Chr7 3128553 3131084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00349 102 328 Receptor kinase-like Gene Family AT1G11050 50.980 3.21e-78 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip07g00349 PK_Tyr_Ser-Thr 7.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00349 - - ahf:114924878 372.089