Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00341 ATGCATATTGTTTTGATAGAACTCCTTGATGAAGAGGAATTTGGGGAGGCTGCAGAATCCAGAACCTTCGATGAAGATTCAACAAATCCAGCAAAGGAACTCGGCCTTTTGGCTGCCAAGATCTCGGAATATGCGGTGGATTTAGCGATACGTCAAGGACAGTATCTGTTTCGTGCTGGAAGATTCATTAAGAATCTTGAAAAAGAAAAGCAGAAGCTGATTTCAACTCTAGGTAGTGTGCAGAAAAGAGTTGAAGCAACTGATAAAACAGAACAAGTCAAAGATTCTGTTCTGAAGTGGATCAATGAAGCCGAAAAGCTTGTAGAAGAGGTGGAGAATCTGGAAACAGAAATAGAGACCAATGGAGGCAGTGAGTATTTATATCCTGGAAACATTGTTTACTTCAAATCCACAAAAAAAGCTCCGGATCAAATTTTGGAGGCGTTGCAAGATGATAGTATCAATTTGATTGGACTCTATGGAATGGGAGGTTCTGGTAAGACAATACTGGTGAAAGTAGTTGGTAACAAGGCCAAGACTATGAATCTTTTCGACCGAGTTGTGCTTGCCACTGTGTCACAAACTCCGGATATCAAAGTGATTCAGAAGGAAATTGCTGAATTGATGGGGCTGAAATTTTCTGAAGAAAATAAAGCATCAAGAGCAATAAGAATATCTTTGGGTCTGCAAAGTAAACAGAGAATTCTTGTGATCTTGGATGATGTTTGGGCTAAGCTCAAGCTTGAAGATATTGGAATTCCTTGTGAAGAGGGTAACCAATGCAGCTGCAAGGTCCTTTTGACTACGCGTCTGCGTGGAGTTTGCACCTTGATGAACTGTCAAAGAGAGATTCCTTTACATCTCTTGTCAGAAGAGGAAGCTTGGATATTTTTCAAAGAGTATTCAGGAATAGGTGACAATTCGCCATCCGAGGTATTAAAGGTGGCCTCAAATGTTGCTATGGAATGTAAAGGGTTACCAATCGCAATTGAAGCAGTGGGATCTTCCATGAAAAAGAAGCCTATTGAGGTCTAG 1035 0.4068 MHIVLIELLDEEEFGEAAESRTFDEDSTNPAKELGLLAAKISEYAVDLAIRQGQYLFRAGRFIKNLEKEKQKLISTLGSVQKRVEATDKTEQVKDSVLKWINEAEKLVEEVENLETEIETNGGSEYLYPGNIVYFKSTKKAPDQILEALQDDSINLIGLYGMGGSGKTILVKVVGNKAKTMNLFDRVVLATVSQTPDIKVIQKEIAELMGLKFSEENKASRAIRISLGLQSKQRILVILDDVWAKLKLEDIGIPCEEGNQCSCKVLLTTRLRGVCTLMNCQREIPLHLLSEEEAWIFFKEYSGIGDNSPSEVLKVASNVAMECKGLPIAIEAVGSSMKKKPIEV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00341 344 Coils Coil 63 83 - -
Aip07g00341 344 PANTHER PHOSPHATASE, PUTATIVE-RELATED 135 340 - -
Aip07g00341 344 PANTHER - 135 340 - -
Aip07g00341 344 Gene3D - 128 284 IPR027417 -
Aip07g00341 344 Pfam NB-ARC domain 142 340 IPR002182 GO:0043531
Aip07g00341 344 PRINTS Disease resistance protein signature 156 171 - -
Aip07g00341 344 PRINTS Disease resistance protein signature 229 243 - -
Aip07g00341 344 PRINTS Disease resistance protein signature 323 337 - -
Aip07g00341 344 Coils Coil 97 121 - -
Aip07g00341 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 342 IPR027417 -
Aip07g00341 344 Gene3D - 288 344 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00341 Aip-Chr7 3088854 3090360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00341 154 344 WRKY Transcription Factor Family AT5G45050 27.273 6.38e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00341 - - aip:107606540 551.206