Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00288 ATGAAGATGATTGAGGTTTCCCAAATCGCTGCTGAGCAACTTGTTCTCGAACTCAGCAACCCCGATCTCCGAGAAAATGCTCTTCTCGAACTCTCCAAGAAGAGAGAGTTATATCAAGATCTCGCTCTGTTACTGTGGAATTCCTTTGGCACCATTGCAGCGCTTTTACAGGAAATAGTTTCTATATACCCTGTTCTTTCGCCCCCAAATCTTACTCCAGCTCAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATTTGTATCCTTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAATATTTGAGGCTTACTAGCCTTGGTGTCATTGGTGCTTTAGTGAAGGTTGATGATACGGAAGTTATAAGTTTCCTTCTTTCAACAGAAATAATTCCGTTGTGCCTTCGCACTATGGAACTGGGAAGTGAATTGTCAAAAACAGTTGCAACCTTTATAGTTCAGAAAATTCTTTTGGATGATGTGGGTTTGGATTATGTTTGTACCACAGCGGAACGCTTTTTTGCAGTAGGTCGAGTTCTGGGGAACATGGTGGCAGCTCTGGCTGAGCAACCCTCATCTCGCCTTTTGAAGCACATTATTCGTTGCTATCTTCGTCTATCCGATAATCGGAGGTTGGATAACAGGGCTTGTGATGCACTAAGAAGCTGTCTTCCGGAGATGTTAAGAGATGCTACTTTTAATACCTGCCTTCGTGAAGACCAAACAACTAGGAGGTGGCTACAGCAGTTGCTTCACAATGTTGGAGTGAATAGGGTTCCTCCACTACAAGCCGGAGCAGGATTCGATCATAATATGATGGTGGCGTGA 894 0.434 MKMIEVSQIAAEQLVLELSNPDLRENALLELSKKRELYQDLALLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMELGSELSKTVATFIVQKILLDDVGLDYVCTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNRRLDNRACDALRSCLPEMLRDATFNTCLREDQTTRRWLQQLLHNVGVNRVPPLQAGAGFDHNMMVA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00288 297 PANTHER BNAA05G20110D PROTEIN 10 293 - -
Aip07g00288 297 SUPERFAMILY ARM repeat 16 236 IPR016024 -
Aip07g00288 297 Pfam Cell differentiation family, Rcd1-like 14 276 - -
Aip07g00288 297 Gene3D - 4 277 IPR011989 -
Aip07g00288 297 PANTHER UNCHARACTERIZED 10 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00288 Aip-Chr7 2649407 2652793 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Aip07g00288 Rcd1 9.3e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00288 K12606 - gmx:100784529 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00670 01 10745054 10752062 Aip07g00288 07 2649407 2652793 PCT