Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00285 ATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGAAATGCTTCAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGGGTGGATACGGATCATTTTTGTGCAAAGGTGCAGATAAAGAAAGGTGCCTATGATGGCAGGGTACTCAAAGCAGTGGAATATGAAGACATTTGTAAAATAGCACAATGA 321 0.4361 MSKALAEKGYYKQKGVVRKVIDKYVGEIEMLQSKHVLRVDQEELETVIPQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIKKGAYDGRVLKAVEYEDICKIAQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00285 106 Pfam KN17 SH3-like C-terminal domain 1 40 IPR041330 -
Aip07g00285 106 Gene3D - 1 48 - -
Aip07g00285 106 SMART kow_9 48 75 IPR005824 -
Aip07g00285 106 PANTHER - 1 106 - -
Aip07g00285 106 CDD KOW_KIN17 51 104 IPR041995 -
Aip07g00285 106 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 106 IPR037321 -
Aip07g00285 106 Gene3D - 49 105 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00285 Aip-Chr7 2604140 2604460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00285 1 105 C2H2 Transcription Factor Family AT1G55460 82.857 1.16e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00285 K13102 - adu:107488077 196.823