Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00276 ATGTCAGTTGTATTTACGGACACTGAGATGAATGAGCAATACCGGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTCACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATATACCGAGGGAGCGTTTTTTTCTGAATCTGATATGTCGGATTATATCGTTCAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTCCATCTTTGAAATTTAGTCAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGAGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACCAATTTGTGGGCTATGGTCCCAGAGATATGTATAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGTAATATTCAGCGGGGTTAACCACCACAACCAAACAATTGTTTTTGCTGCTACGTTAATCGCGGACGAAACGACTGATACATATGTTTGGCTCCTGCGTCAGCTCATGTTTGCAATGAGGGGCAAGACCCCGACCTCAATCATAACTGATGGGGCCATGGCGATTAGGAATGCAGTGAGAGATGTATTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACCTTATTCGAAATGCAACTAGCAATGTTGGAAATCCATCGTTTACATCTAAATTTAGAAAAATCATGACAAAAGACTACGAGATTCCCGTGTTTAAGCGTAAGTGGGTTCAGCTTATCGAAGAATTTGGCATTGAGGATAAGCCGTGGGTGATCAACATGTACGAAGAGAAGCATATGTGGGCTACTGCATATCTAAGAGGAAAATTCTTTGCTGGCTTTAGAACTACATCAAGATGTGAAGGTTTACACTCATTTGTGGGAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGTAGAGCATTTTCAAAGGTGTGTAGCACACATGCGCTTTAACGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCTGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCAATTCTCTCCAGAGCTAGATCAATGCGGGTTCTGAACATAGATAACACTGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTACGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTACGAATGGAGTCATTTGGTATTCCCTGCGAACATATTGTGAAAATTTTGGTTGACAGAGACATCCGTGAGATTCCCCGTCGTCAAAGTGCTTTGGTGGAATTTTCTAAACAACTGGCTGCTATTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTTCTCATCTTACAAGGCTGCAGACGAAGGAGATAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCCAACCACTGGAGGCTCAGGACAGCCATCTAAGAAGAAGAAGCGGCAACATTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTGATAGAAAATGAAGCAATCGGTTCGGACGATGGCGAAATGTGTACCGAAGCAACGGCTGAGTTAGATAGTGATAGTTAG 2154 0.4178 MSVVFTDTEMNEQYREDDDFNQQEELVSHQDMMDEQNEFEQDFRDEYTEGAFFSESDMSDYIVQAAYAVDSVQDIPSLKFSQNFAEEIGKYHFSTLQLAFDFYMKYSKSKSFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYQFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRVIFSGVNHHNQTIVFAATLIADETTDTYVWLLRQLMFAMRGKTPTSIITDGAMAIRNAVRDVFPEVRHRLCAWHLIRNATSNVGNPSFTSKFRKIMTKDYEIPVFKRKWVQLIEEFGIEDKPWVINMYEEKHMWATAYLRGKFFAGFRTTSRCEGLHSFVGRYVGSRYDLTSFVEHFQRCVAHMRFNEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPILSRARSMRVLNIDNTDDCIKYIVCKHGRPDFTWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKILVDRDIREIPRRQSALVEFSKQLAAIAAKVPERYEETRDLIMGLFSSYKAADEGDNQPHSGVARSSNPYVHPTTGGSGQPSKKKKRQHCSVCQMEGHKKTTCPWQKDIDNNVIENEAIGSDDGEMCTEATAELDSDS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00276 717 MobiDBLite consensus disorder prediction 639 660 - -
Aip07g00276 717 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Aip07g00276 717 MobiDBLite consensus disorder prediction 632 669 - -
Aip07g00276 717 PANTHER OS02G0262500 PROTEIN 289 583 - -
Aip07g00276 717 PANTHER OS02G0262500 PROTEIN 89 286 - -
Aip07g00276 717 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 289 583 IPR031052 GO:0006355
Aip07g00276 717 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 286 IPR031052 GO:0006355
Aip07g00276 717 Pfam MULE transposase domain 291 366 IPR018289 -
Aip07g00276 717 ProSiteProfiles Zinc finger SWIM-type profile. 547 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00276 Aip-Chr7 2371725 2374082 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g00276 FAR1 1.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00276 - - ahf:112720852 1347.03