Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00268 ATGGAAACCGCATGGAATAATGATAATGATGATGGCATTGACATGATGGATAAGTCTAGTCATCATCATCATTATCATCATCATCATGATCATGATCATCCACATTCTTCCTTCACTGACCTACATCATCATCATCACCATCATCAGGTCATTGATGAGATGGATTTCTTCGCTGAGAACAAGAACAAAAATGATAACAACAACATCCATGATAATATCCAAGATGATCATGATAATAATGATCATGATCATGATGAAATGGTGCACAGTTCTATGGAGCTTCATGTAGATACTAGCTTAGATCTTCGTATGAAGAACACAGATGGCAATAGCTCATCAATGGAACCATCAGAAACTATGGATGACAAGAAGAGTAATGATTTGGGATTGCTAGCAGAATTGCAACACGTGAATGCTGAAAATCAAAGATTGAGAGAGCTTATTGAAGAACTTAACAATAACTATAACACCTTACACATGCAACTTATCAACCTCATGCAGCAAAGGGATCAAAATCATGCGGTAATTACTAATTTTAAGAAGGAAGATATGGTGGGAAGAACATTCCTAGACATGGGTGTTGCTGGTTTTGGTGAAAAGGATAATGATCCTTCTCAACAATCTTCAGATATCAAACTTGGAGCAGGAGGAGAAAGCAAAAGCATGGTTGATAATAATAATAATAATATTGTTTTGGAGAAAGACAATAATAATAATAAAGTTGATGGTGGAAACAGAGAGAGAAACACAACAATGGTTACTGATGAAGGATTATCAGGTTGGCTCTCTAACAAGGTTTCAACGAGGTTGAATTCTTTCAGGGATGTTGATCAAGCTTCTGAAACCATGTCTATGATCAAGAAAGCACGTGTATCAGTGAGAGCAAGATCAGAATCTTCCATGATTGCAGACGGATGCCAATGGCGAAAGTATGGACAGAAAATGGCAAAAGGAAATCCATGTCCGCGAGCTTATTATCGTTGCACCATGAGTACTGGTTGTCCTGTTCGCAAACAAgtacaaAGGTGTGCTGAAGATAGAAGTGTGTTGATAACAACATATGAAGGCCAACACAACCATCCACTCCCTCCAACTGCCAAGGCAATGGCCTCAACCACCTCTGCCGCCGCCTCCATGCTCCTCTCCGGTTCGATGCCAAGCGCCGACGGCCTAATCAACCCCACCATACTCGAAAGCGCCACCCTTCCTTGCTCTCAAAACATGGCTACACTCTCAGCTTCAGCTCCATTTCCAACCATAACTTTGGACCTAACACAAACCGCCACAAATAATAATAACAATAATAACAACAACAACTTTAACCCAAATTCTTTAAGGGATTTGCCTAATAATCAAAGCCAACAACTTAGTCTCTTAACACCCCTTTTGGCTCAGAAATTTATGTCAGCTCCAAACATGTTTGGACATGTTCTTAATGGTGATCAAAGCAAGATTATTTCAGGATTACAAGGATCAATTGACACAACAACAACAGGTTCATCTTTTGCTGATACAATAAATGCTGCAACTGCTGCTATCACTGCTGATCCTAATTTCACTTCAGCTCTTGTTGCTGCCATATCTTCCATCATTGGAAATTCAACACATCATCATCAAAGCAGTAACAATAATGATGCATGA 1641 0.3924 METAWNNDNDDGIDMMDKSSHHHHYHHHHDHDHPHSSFTDLHHHHHHHQVIDEMDFFAENKNKNDNNNIHDNIQDDHDNNDHDHDEMVHSSMELHVDTSLDLRMKNTDGNSSSMEPSETMDDKKSNDLGLLAELQHVNAENQRLRELIEELNNNYNTLHMQLINLMQQRDQNHAVITNFKKEDMVGRTFLDMGVAGFGEKDNDPSQQSSDIKLGAGGESKSMVDNNNNNIVLEKDNNNNKVDGGNRERNTTMVTDEGLSGWLSNKVSTRLNSFRDVDQASETMSMIKKARVSVRARSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAKAMASTTSAAASMLLSGSMPSADGLINPTILESATLPCSQNMATLSASAPFPTITLDLTQTATNNNNNNNNNNFNPNSLRDLPNNQSQQLSLLTPLLAQKFMSAPNMFGHVLNGDQSKIISGLQGSIDTTTTGSSFADTINAATAAITADPNFTSALVAAISSIIGNSTHHHQSSNNNDA 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00268 546 Pfam WRKY DNA -binding domain 304 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00268 546 MobiDBLite consensus disorder prediction 197 252 - -
Aip07g00268 546 MobiDBLite consensus disorder prediction 32 46 - -
Aip07g00268 546 Coils Coil 134 168 - -
Aip07g00268 546 ProSiteProfiles WRKY domain profile. 297 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00268 546 SMART WRKY_cls 302 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00268 546 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 34 541 - -
Aip07g00268 546 Gene3D WRKY domain 287 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00268 546 MobiDBLite consensus disorder prediction 201 252 - -
Aip07g00268 546 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 541 IPR044810 GO:0003700
Aip07g00268 546 MobiDBLite consensus disorder prediction 16 46 - -
Aip07g00268 546 MobiDBLite consensus disorder prediction 60 80 - -
Aip07g00268 546 SUPERFAMILY WRKY DNA-binding domain 295 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00268 Aip-Chr7 2269249 2275792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00268 48 544 WRKY Transcription Factor Family AT1G62300 44.717 3.92e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g00268 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00268 - - adu:107496306 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00268 07 2269249 2275792 Aip07g00268 07 2269249 2275792 ECH
Aip07g00268 07 2269249 2275792 Aip04g00520 04 6174956 6177370 ECH