Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00240 ATGAAAAAGGGTAAGGTGGTCCGTTCGGATGACGAGGCTGAGGGTGAGGCCCAGCTTAACTCTGTGTCTAATTACCATCTTGAAGATGAGGATTCTGAGCCAGTTTCTTTTGCTGCATTACCAATTCAATGGGGTAATAAAACTGTCAAGAATTCTGGTCGAACCGAAGAGAGGGTGTTCCTACATGGCTCCACGGATGAGGGGCTGAAGGCAGTTATGGTGCAGGTCACAGCATGGAGATTTAATCTTTCTAGAGCAAAACCTGTGATATCATTGCTATCATCAAAAGAGAAAAATTGGATTGAGCTGAAGAAGCCAAGGAATAGCTATCTTGATACTATAAGGACCATTCTGATCACCGTTCACTTCCTGCATCTAGTAAAGAGAAATCCCAAGACATCAGCCAATTCTGTCTGGGGTAACATGTTTAAGAATAGGGAATTTAGCTTATCTAAGTCTAAGCCTTCAGAAAAAGATTTGCTGGACCATATGCATCTGATTGATGAAGCTGCCAAAAGAGATGCTGTCTTAGCTAAGTCCCAGCTTTTGCTCTCCGTTTTGAAGGCGAAAGTGGGGAATAAAAATCTTTCTAACAAGGAAGTTAAAGATTTGGTACAGCCTGAAGAGTCTGAAGAAGAGGATGATTCGTCTCATGAAGTTTGTGTGATTTGTGATGATGGTGGTAATCTTACATGTTGCGAAGGACCATGCATGAGATCATTTCATGCGAGAAAGATGGATGGTAAAGGATCTAAGTGTGCTTCTCTTGGTTTCTCTCAGAAGGAGCGGATCCCGAGCTTTTATTGTAAGAATTGTTTATATAATCAGCATCAGTGCTTTGCATGTGGCAAGCTGGGATCTTCTGATAAAGTTAACGGTGCTGAGGTCTTTAAATGTGCTTCTGCAACCTGTGAATACTTCTATCATCCACATTGTGTTGCCAAGTTACTTTCCCAGATAAATAACCATGATGCAGAGGAGCTTGAGAGAAACATTTCTGGCGCAAATTCTTTCACCTGTCCTGTTCATTATTGCTGTGTCTGTAAAGAAGTTGAAAATGTAATGAAACCTGAGCTGCAATTGGCTGTTTGTAGACGTTGTCCGAAATCATATCACCGCAAATGTTTGCCAAGAGAGATTGCTTTTGAGGACGATGATGATGATGATGTTATCATAAGGGCTTGGGAAGGTCTTTTGCCAAACAAACGCATTCTTATTTATTGCCTGAATCATGATATTGATGAAATATTAGGGACCCCTCTAAGAGATCATATAATATTCCCCTATGAAGAAGATACTGTCCAAGAAATTAATGACAATAATGGGAAGATGAAGCCTGCAACCAAAGAGGGAGTTAGGCCAACTAAGAAAAATGGTGATGTAGATAATGGAAAATCCAGTTGTTCGACTGAAAATGTCAACAGATCTAAAGTGACTGGAAAGCTGTCTCCTGGAGAAGTTGGTAGCAAGAACAGTCCTGAAAAGATGAGTTCTGGTTCAAATATTGCAAATAAACCAGAAGCTAATAGAAAATCTGGTTGTTTGACCAAGGATACTACTGGATCTAAAGCGACTCCAAAGCGCTCTGCTGGGAAAGGTGGTGTCAAGAACAATACTGGAAAGAAGACTTCCCCTTCAAAGATTACAAAGCAACCAAAAGCTAATGGAAAGCCATCTGGGGAAGTTTTTGCAAAGAACAGTTCTGAAAAGGCAATCTCTGGTTCGACTATTGCGAAGCAACCAAAAGCTAACGGAAAATCCGGTTCTGGTTTGACTGAAAATAGCGCAACGATTCCAAAGAAATCTGAAATGTCCGAGGATAGCCAGCCCATACGAGCTCTTTTGGTGAAGGATTCCAAGCAAACTAATCCAGTTAGTAAGGGAAAGCCACCCCTATTGTCCCTTTTGAAACACAAGGCTATAGCCAAGGAGCTACGTGAGCAGCAATCTGGCCAACATCGAGTTGCAGAGATGGAAAGCCGCAATGCTGAATGTTTGCCTGCTGATAGGAATACGGATGATAATTGTGGGGACAACATCATGCCAAGCCAAGAACCCCCAAAGTCACCTGATGGTGAAAAAGACCAAGCATCCGTGAATGGACACAGGAAAAGAAGCTCACATCATTTTAAGGATGACCAAGATAACCAAGAGGGACCTGAATGTAAGAAGAGCAAGTCCGAGAAGACATCGTCAACCAAAAGGAAACACAGCGAGGAAAATGATGGAAGTGGCGTCAGTGTGGTCTCATCAGCCAAAAGGCAGACTGTAGAGGAACAACATAGGGAGGAGGAGGATCAGTGCCAGATAGAGTCAAATACAAGGCAAAGTGTTGGCAACATGGCTTATAATTATGCCAGACCAGTTTCAGCATTTGAGTCATCTTATAAAGCGACTCCTGCAGATGTTGATGAGGAAAATAGGATGTCCGTGCTTTATGGTTTTGCAGCTGGTCCTAACGTTGAATATGCCAGCACGCATTCAGCAGGTTGGATTGATGATGATGATGATGATGATGATGAGGATGATGATGAGTAG 2538 0.422 MKKGKVVRSDDEAEGEAQLNSVSNYHLEDEDSEPVSFAALPIQWGNKTVKNSGRTEERVFLHGSTDEGLKAVMVQVTAWRFNLSRAKPVISLLSSKEKNWIELKKPRNSYLDTIRTILITVHFLHLVKRNPKTSANSVWGNMFKNREFSLSKSKPSEKDLLDHMHLIDEAAKRDAVLAKSQLLLSVLKAKVGNKNLSNKEVKDLVQPEESEEEDDSSHEVCVICDDGGNLTCCEGPCMRSFHARKMDGKGSKCASLGFSQKERIPSFYCKNCLYNQHQCFACGKLGSSDKVNGAEVFKCASATCEYFYHPHCVAKLLSQINNHDAEELERNISGANSFTCPVHYCCVCKEVENVMKPELQLAVCRRCPKSYHRKCLPREIAFEDDDDDDVIIRAWEGLLPNKRILIYCLNHDIDEILGTPLRDHIIFPYEEDTVQEINDNNGKMKPATKEGVRPTKKNGDVDNGKSSCSTENVNRSKVTGKLSPGEVGSKNSPEKMSSGSNIANKPEANRKSGCLTKDTTGSKATPKRSAGKGGVKNNTGKKTSPSKITKQPKANGKPSGEVFAKNSSEKAISGSTIAKQPKANGKSGSGLTENSATIPKKSEMSEDSQPIRALLVKDSKQTNPVSKGKPPLLSLLKHKAIAKELREQQSGQHRVAEMESRNAECLPADRNTDDNCGDNIMPSQEPPKSPDGEKDQASVNGHRKRSSHHFKDDQDNQEGPECKKSKSEKTSSTKRKHSEENDGSGVSVVSSAKRQTVEEQHREEEDQCQIESNTRQSVGNMAYNYARPVSAFESSYKATPADVDEENRMSVLYGFAAGPNVEYASTHSAGWIDDDDDDDDEDDDE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00240 845 MobiDBLite consensus disorder prediction 536 553 - -
Aip07g00240 845 CDD PHD2_NSD 278 343 - -
Aip07g00240 845 MobiDBLite consensus disorder prediction 461 479 - -
Aip07g00240 845 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 9 609 - -
Aip07g00240 845 MobiDBLite consensus disorder prediction 824 845 - -
Aip07g00240 845 Pfam Cytosine specific DNA methyltransferase replication foci domain 17 134 IPR022702 -
Aip07g00240 845 SMART PHD_3 278 344 IPR001965 -
Aip07g00240 845 SMART PHD_3 220 273 IPR001965 -
Aip07g00240 845 SMART PHD_3 345 412 IPR001965 -
Aip07g00240 845 MobiDBLite consensus disorder prediction 490 526 - -
Aip07g00240 845 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 9 609 - -
Aip07g00240 845 MobiDBLite consensus disorder prediction 639 668 - -
Aip07g00240 845 MobiDBLite consensus disorder prediction 755 770 - -
Aip07g00240 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 275 IPR013083 -
Aip07g00240 845 MobiDBLite consensus disorder prediction 688 742 - -
Aip07g00240 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 365 IPR013083 -
Aip07g00240 845 MobiDBLite consensus disorder prediction 566 604 - -
Aip07g00240 845 SUPERFAMILY FYVE/PHD zinc finger 334 379 IPR011011 -
Aip07g00240 845 MobiDBLite consensus disorder prediction 437 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00240 Aip-Chr7 2056357 2061169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00240 209 313 PHD Transcription Factor Family AT3G14980 30.841 7.60e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00240 - - adu:107496360 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00240 07 2056357 2061169 Aip07g00240 07 2056357 2061169 ECH
Aip01g00638 01 9883101 9897560 Aip07g00240 07 2056357 2061169 PCT