Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00230 ATGAATTTTACTATGTTTCCCATTTCAAGGATCCTGTTTTTCTTTGGTGTTCTTCTTCTTCTTCTTCCCTTCTTTGGTGAGTCTAATAAATCATCATTAGAATATGATCCTTTCTTCAATTTCCTTAGTGCTATTGACCCCAAAAATGTTCTTAACATAAGTAGTAGCAATGTTATTATTGGTTCATCACCATGCTTGGTCAACTTGAATACTAATAATAATAATAATAACAATGGTGTTATTATTATAAGATGCAACAAAAATGCCACCAATATTGTTGAGATAAGGCTTGAGAATTTGAACCTTAGTGGCACAATTGATGCTGATTCTCTATGCAAGCTTCAAAAATTAAGGGCTCTTAGCTTAGCCAACAACAACATCAAAGGCAAAATCCCACACTCAATTTTGCATTGTACAAGGTTGATGTACCTAAATCTTACAAGAAATCAATTGAGTGGGAATGTACCTACTAGATCCTTAGCCAAGTTGAAATTCCTCAAAAAATTGGACATATCCAACAACAATTTCATCCCAATTAAGCATAATAAGTTCTCTACATATTATGTGACACCAAATATCAAAGATGGGACAAAGGGTAGTATTGTAAATTCATCACCATATAATGATACCTCAAATAATGGTAAAGAAGGATCATCATCTCCAATAATATCTATGAAATTGTTAATACCATTGATCTTAGGGCTTGTAATTCTTTTAATATCACTTATCTTTGCCGCCAAGAAATTACCAAAGCTATGTAGAGAGGGAATAATAAAAGTACTAATAAGAAGTCATCAAGTTTCTCCATCATCACAAAAGTCCATAACAAGTGATCAAATGGTGAAGAAGGGTGGTTTAGAAGATCATTCACCATCACTAGGGCTTGTGTTCTTTGTTGAAAAAGAAGAGAGGTTCACCATGGAGGACTTGCTTCGCGCCGCGGCGGATCTAAGGAGTGAGAGCTTTTGTAGCAGCCTATACAAGGTGAAGCTTAATAATGTGGAGAATGATGTTCACTATGCTGTGAAGAGGTTAAAGAATGTTCAAGTTTCTTGTGAAGATGAGTTTGGAGAAACATTGAGGAAGATAAGCAAATTGAAGCATCCAAATATTCTTCCACTTGTTGGCTACCGTTCTACTAGTGAAGAGAAGCTTGTCATCTACAAATATCAAACCAATGGAAGCCTCCTCAATCTCTTGAATGATTACATAGCAGGTAGAAAACATTTCCCATGGAAACTGCGTCTCTCTATAGCATGTGGAATTGCAAGGGGTATGGCCTTCATATATAGGAAGAAGTTGAATAACAATAACAAAGAAGAAGAAGAAGAAGATGATTCCATTATTCCTCATGGGAACCTCAAGCCATCAAACATACTCCTCAATGAAAACAATGAACCACTCATAAGTGAGCATGGCCTAACAAAATTCATGGATCCAAATAGGTCCGGGTTCCTCCTTTCCTCTCAGGGATATACCGCGCCAGAAAAATGCATTTCTGAAAAATCTGATGTGTATAGTTTTGGCGTGATCTTGCTCGAGTTATTAACCGGCAAGAGCATAGAGAAAACCCGAATCGATCTCGCGAGATGGGTTCGATCTATGGTAAGGGAAGAATGGACCGGAGAAGTGTTTGATAAAAAAGTTGGGCCAAATGAACATCAATGGGCTTTTCCAATATTGAATGTTGCCCTAACTTGTGTTACAAGGTTCCAAGAAAATAGGCCAACCATGGGAGAGATCTTAGAGAGGATTGAAGAGATCGAATTTGACAAAACCCCCCAAACTTCGTATCTGATCGAAGCACCAACTGGGTTCTGTCTGAATTTTGAGATAAGAACAGATGGAATCGGATCTTGGAAAGCTCTTCATTGGGGGGATTTCATGGGACACTGA 1896 0.375 MNFTMFPISRILFFFGVLLLLLPFFGESNKSSLEYDPFFNFLSAIDPKNVLNISSSNVIIGSSPCLVNLNTNNNNNNNGVIIIRCNKNATNIVEIRLENLNLSGTIDADSLCKLQKLRALSLANNNIKGKIPHSILHCTRLMYLNLTRNQLSGNVPTRSLAKLKFLKKLDISNNNFIPIKHNKFSTYYVTPNIKDGTKGSIVNSSPYNDTSNNGKEGSSSPIISMKLLIPLILGLVILLISLIFAAKKLPKLCREGIIKVLIRSHQVSPSSQKSITSDQMVKKGGLEDHSPSLGLVFFVEKEERFTMEDLLRAAADLRSESFCSSLYKVKLNNVENDVHYAVKRLKNVQVSCEDEFGETLRKISKLKHPNILPLVGYRSTSEEKLVIYKYQTNGSLLNLLNDYIAGRKHFPWKLRLSIACGIARGMAFIYRKKLNNNNKEEEEEDDSIIPHGNLKPSNILLNENNEPLISEHGLTKFMDPNRSGFLLSSQGYTAPEKCISEKSDVYSFGVILLELLTGKSIEKTRIDLARWVRSMVREEWTGEVFDKKVGPNEHQWAFPILNVALTCVTRFQENRPTMGEILERIEEIEFDKTPQTSYLIEAPTGFCLNFEIRTDGIGSWKALHWGDFMGH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00230 631 PANTHER TYROSINE KINASE FAMILY PROTEIN 29 593 - -
Aip07g00230 631 Pfam Protein tyrosine and serine/threonine kinase 331 584 IPR001245 GO:0004672|GO:0006468
Aip07g00230 631 SUPERFAMILY L domain-like 73 179 - -
Aip07g00230 631 Gene3D Transferase(Phosphotransferase) domain 1 392 601 - -
Aip07g00230 631 Gene3D Ribonuclease Inhibitor 56 189 IPR032675 -
Aip07g00230 631 Gene3D Phosphorylase Kinase; domain 1 282 390 - -
Aip07g00230 631 PANTHER OS05G0588300 PROTEIN 29 593 - -
Aip07g00230 631 ProSiteProfiles Protein kinase domain profile. 311 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00230 631 SUPERFAMILY Protein kinase-like (PK-like) 325 599 IPR011009 -
Aip07g00230 631 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00230 Aip-Chr7 1984346 1991837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00230 6 591 Receptor kinase-like Gene Family AT4G31250 28.423 8.14e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip07g00230 PK_Tyr_Ser-Thr 6.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00230 - - gmx:100807491 612.453