Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00222 ATGTTGAAGCAAGACCGCATCGAACATGACAATGAATCTTGCTTGACACATGATCAAAATGACTTGAGCAACAAGATAAGGGAACTGGAAAGTGCTATGCTAGGATCTGATGCAGATATTCTAAACACATATGGTGCTGCTATGATTCCACAAGAATGTGACTCATTCTTGAGGTGGAGGAAAATGATGGAGGTGATATCGCGAGGCGATTTGAAAGAGATGCTTTGTGCTTGTGCAAAAGCAATGTCAGAGAATGACATGGAGACAACTGAATGGCTGATTTCTGAGCTGCAAAAAATGGTGTCGATTTCTGGGGATCCAGTCCAAAGATTAGGAGCATACATGTTGGAGGCACTTGTTGCAAGGCTAGCCACTTCAGGAAGCACAATCTACAATGCCTTGAGATGCAAGGAACCTACTGGCAATGAACTCCTTTCTTATATGCATATGCTTTATGAGATCTGTCCATACCTCAAATTCGGATATCTTTCTGCGAATGGATCGATAGCCGAAGCAATGAAGGATGAAAATGAAGTTCACATAATTGATTTTCAGATTAACCAAGGAGTTCAGTGGATAAGTCTCATAAAAGCACTTGCTGCAAGGCCTAATGGATCACCAAAGATCAGAATAACATGTTTTGATGACTCTACCTCTGCTTTTGCCAGAGGAGGAGGACTTAACATAGTTGGAGAAAGGTTATCAAGAATTGCGAATTCATGTAAGGTTCAATTTGAATTTCATGCTCTAGAAGTTTCCCCTTCTGAGGTGAAGCTTGATGATCTTGACATTAGGCCTGGTGAGTCCATTGCTGTGAATTTTGCCATGATGCTTCACCATTTACCGGATGAAAGCGTGGATAGCCGGATAAATCATCGCAACCGGTTGTTAAGACTGGCAAAGTTCTTGTCACCTAAGGTGGTTACCTTGGTTGAGCAAGATTGTAACACAAGTAATCTTCCTTTCTTCCCACGTTTTGTGGAAACAATGAACTACTACTTGGCTGTTTTCGAATCAATCGACGCAGCTCTTCCAAGAGATCACAAAGAGAGGATCAATGTGGAACAGCATTGCCTTGCTAGAGAAGTTGTTAATCTGATAGCATGTGAAGGTGCAGAAAGAGTCGAACGCCACGAGGCTCTGAAGAAGTGGAGATTGCGCTTCGAAAGGGCCGGATTTGCACCATATCCTTTGAGTTCTTATGTTAATTCTTTGATTAGGCAGCTTCAAGAAAGCTACCCTGGACAATACACTCTAGAAGAGAGAGATGGTGCTTTACTTCTTGGTTGGAAAAATCAATCTCTTGTTGTCTCTTGTGCTTGGAGATGA 1329 0.4206 MLKQDRIEHDNESCLTHDQNDLSNKIRELESAMLGSDADILNTYGAAMIPQECDSFLRWRKMMEVISRGDLKEMLCACAKAMSENDMETTEWLISELQKMVSISGDPVQRLGAYMLEALVARLATSGSTIYNALRCKEPTGNELLSYMHMLYEICPYLKFGYLSANGSIAEAMKDENEVHIIDFQINQGVQWISLIKALAARPNGSPKIRITCFDDSTSAFARGGGLNIVGERLSRIANSCKVQFEFHALEVSPSEVKLDDLDIRPGESIAVNFAMMLHHLPDESVDSRINHRNRLLRLAKFLSPKVVTLVEQDCNTSNLPFFPRFVETMNYYLAVFESIDAALPRDHKERINVEQHCLAREVVNLIACEGAERVERHEALKKWRLRFERAGFAPYPLSSYVNSLIRQLQESYPGQYTLEERDGALLLGWKNQSLVVSCAWR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00222 442 Pfam GRAS domain family 72 442 IPR005202 -
Aip07g00222 442 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 441 - -
Aip07g00222 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 441 IPR005202 -
Aip07g00222 442 ProSiteProfiles GRAS family profile. 62 442 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00222 Aip-Chr7 1922671 1925241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00222 13 442 GRAS Transcription Factor Family AT1G50600 64.501 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip07g00222 GRAS 3.4e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00222 - - gmx:100817120 668.692