Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00220 ATGGACGCAGCTGCTACCATTACAGCCACCACCTCGAGCTCAGGCTCAGAGCACCATGCCCGGGTCCATGAAGATCCGAATCCAACCGGGTCGGGTTTGAATGCTGAAGCTTCTGTTGGTGGGGCAAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCTCGGTCGGCGTGCATAACCATACCTCCGGGGTTGAGTCCGACGTCGTTTTTGGAGTCTCCTGTGCTCCTTTCAAACATGAAGGTGGAGCCTTCACCAACTACAGGTTCCCTTCCAAGGATTCATCAAACAGCACATGGTTCTATGGTTTCTGCTGCATCAACTGCATTTCCTATAACTTCTGTATGCTTCCATAATAATACCGTTGATGACAGAAAATTGAGCTTCTTTGAGTATAAACCGCCTGGTAGATCGAATATGGTTCCTTCAGACTTCAACAACCATGAAAGTGAACAATCTTCTCGAATTGAAGGTCCAGGAAAAGCTCAACCATTTGCATCTTCACCATTAGCCGAAAGTGAGCCAGCGGACCCTTCTAATGAGTTAAGCCTGTCATCGCCTGTTCAAAAGATCAGTTCGGTTGAAGTTGATTTGGATGAGTTTAACCACAAAGGAAACACATCCACTGGGCTTCAGGCATCACATGTTGAAGTTAGAGGCAGTGGAGCTCCGATCGCACCCGAGAAGGCATCTGATGATGGATACAATTGGCGAAAATATGGACAGAAACTTGTCAAAGGGAGTGAATTTCCCCGCAGCTATTACAAATGCACACATCCTAACTGTGAAGTGAAGAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATATACAAAGGAACACATGATCATCCTAAACCTCAACCAAGCCGCCGATACTCTGCTGGTACCGGTATGTCTGTGCAAGAAGAGAGATCTGATAAGGCTTCTTTGGCCGGCCAAGATGACAGAGCATCCGGTATGTATGGTCGGGGATGTCAAGCAGCTGATCCCAACAGTACTCCAGAGCTATCTCCTCGGGCAACAAACGATGACAGTCCAGAGGGTGCTGGCTTTGTGTCAAATAGGACTAATGATGAGGTTGATGATGATGATCCCTTCTTGAAGAGAAGCAGAAGAATGGAACTTGGAAATGCTGACATCACTCCTGTTGTTAAGCCTATCCGGGAGCCACGGGTAGTTGTACAAACTCTTAGTGAGGTTGATATTTTGGATGATGGCTACCGCTGGCGAAAGTATGGACAGAAGGTGGTAAGAGGCAACCCAAATCCTAGGAGTTATTACAAATGCACGAATGCCGGTTGCCCTGTAAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACCACATACGAAGGTAAGCACAATCACGACGTACCGGCCGCAAGGAGTACTGCAATGATTGGACATACAAGAATCAAGTTAGAAGAAAGCGATACGATTAGCCTCGACCTTGGTATGGGAATCAGCTCAGCAACTGAAAATAGATCAAAGGGCATTTCAGAATATGGTGAAAGTCAAAGTCAAATTCACACCAACAACAACAATTTCAAGTTTGTTCATACTTCCACTCCAGCTCCAGCAGCATACTTTGGTGTTCTAAATCACAGCTCAATTTCTTATGGTTCTAGAGAAAATAGGAATGATGCTCCATCTTTAAACCATTCCTCATATCCTTGCTCACAGAACATGGGAAGAATACTAACTGGTCCATGA 1740 0.4569 MDAAATITATTSSSGSEHHARVHEDPNPTGSGLNAEASVGGARYKLMSPAKLPISRSACITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRIHQTAHGSMVSAASTAFPITSVCFHNNTVDDRKLSFFEYKPPGRSNMVPSDFNNHESEQSSRIEGPGKAQPFASSPLAESEPADPSNELSLSSPVQKISSVEVDLDEFNHKGNTSTGLQASHVEVRGSGAPIAPEKASDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSAGTGMSVQEERSDKASLAGQDDRASGMYGRGCQAADPNSTPELSPRATNDDSPEGAGFVSNRTNDEVDDDDPFLKRSRRMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSTAMIGHTRIKLEESDTISLDLGMGISSATENRSKGISEYGESQSQIHTNNNNFKFVHTSTPAPAAYFGVLNHSSISYGSRENRNDAPSLNHSSYPCSQNMGRILTGP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00220 579 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 36 545 - -
Aip07g00220 579 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g00220 579 ProSiteProfiles WRKY domain profile. 403 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 545 IPR044810 GO:0003700
Aip07g00220 579 Gene3D WRKY domain 393 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 Gene3D WRKY domain 226 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 MobiDBLite consensus disorder prediction 1 36 - -
Aip07g00220 579 MobiDBLite consensus disorder prediction 139 188 - -
Aip07g00220 579 MobiDBLite consensus disorder prediction 282 368 - -
Aip07g00220 579 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 SMART WRKY_cls 408 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 SUPERFAMILY WRKY DNA-binding domain 400 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 MobiDBLite consensus disorder prediction 552 579 - -
Aip07g00220 579 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g00220 579 Pfam WRKY DNA -binding domain 409 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00220 Aip-Chr7 1912524 1917244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00220 47 579 WRKY Transcription Factor Family AT4G26640 56.569 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g00220 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00220 - - gmx:100816583 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00220 07 1912524 1917244 Aip07g00220 07 1912524 1917244 ECH